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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cdf-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVTMEDRSV KADKADRDDN NTTSTELLGK MRQTKVISTN QNNNHLIDRM VSIYEMEMIK  60
   61 SQSTETISDV SDVLEFTVID NCSHGTHTLE HDLRLKGEPI GKSESVKGVS RSLIIQIGMT 120
  121 VIFCALEFIT GVVCSSIAML ADSYHMAADV MALIVAFTCI KIATRPSTRL GYGWVRAETL 180
  181 GGFFNGIFMC TVCVLVFQEA VGRIINVHMI THPLQVLVIG FIGLLINLFG MFNLSGHGHS 240
  241 HGGGSHGHSH GGSHGHSHNN KKTKKNDGHG HSHANGHGHS HDGKSDCNGE EEPDHTRLNG 300
  301 KFRSASAMAN SDANVRLLDN DDNSNDIIER RLSGVNSQNT IIATVDRQMT PYGTHMASEV 360
  361 LNVSSNNLDK SAQKTEQKKD KNVNIHGVWL HLLSDAFGSV IVMISAGFVY FLPTWKIAAY 420
  421 LDPILSISLA SIMGFTAVVL VKTSGEKLLK QTPEGLDLEK VKKDLCSIVG VSKVEKLSVW 480
  481 TLCGQRIIAA AHVNICHPAV FPEAAYKIKN YFHDLGVHST TIEPTFEDTC MQSMRIMVKK 540
  541 VVDGKSIEEP VSVSTENEIT E

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle