YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE29462
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVRDDPGL PLYNTTSPKG HTFRRIRARA RHWFSTRNTP TKACIIFTIL LSIFVLITIC  60
   61 SQGEAKREQP IVENPEIIIN EQVIAGQKTK HSKEESAENL KPVHDIDRQI VEDEMDAPET 120
  121 GGGNEKIVKF TGPTNDRQKA VVKAFQHAWI GYKKYAWGHD TLKPVSKSYS DWFDTGLTIV 180
  181 DGLDTAIIMG LEDEATEATE WIQNTLTFEK DRMVNFFECT IRVLGGMMSA FHLTGKKMFL 240
  241 EKSVDLGDRL LSAFKSPSPI PYSDVNLLKR TATNPQWGAD SSLSEVTTVQ LEYRALSRAS 300
  301 GNSTYEDLTF NVFKHIHKIG CETHEGLCGM FINANTGNFK KDSTITFGAR SDSFYEYLFK 360
  361 QWIQTGKTID WLKEDYGKAM KAMEKYLYRN SKPNKMFFIG ELLSGQTYSP KMDHLVCFIA 420
  421 GTLSQGSQHG FPRKHLDMAE KIGETCHNMY DNPTGLGPEI AHFNMIPGKE DLYVKPLDAH 480
  481 CLLRPEAIEA WFYLYRFTGD KKYQEWGWSA FQAIEKYARI PTGGYSSISN VKQINVRFRD 540
  541 SMESFLLGET FKYLYLLLGD DQTVLPLDKW VFTTEGHPLP IYDH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle