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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: nhr-46
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFRSPPQT AMFPTTASSS FVSAALHQQQ SSPSSNLPVI PSPTDMITVT STSPIPITTS  60
   61 ASPPNLPMFL SFPSTSTTTS ILMDTVLAAQ KLNQQQNQQA FNFMVVKQEN GETGRNFMTM 120
  121 KQDALQAITN TVSRNSPPNV IKGERCVGCG SESAIRVHYG ASSCHGCKAF FRRSVFEGRV 180
  181 YMCSADNHCD ITNESRNRCR ACRLRNCLEG GMNPKHVREE RSKIERMPGN TCTVSAANGV 240
  241 SHSSSAASAS PEHKFSFSLS TIAPSTSTGS FSSGSQPAPI ESTNSSGSEA EVLDRKLIQE 300
  301 NQLTLFMVAL EKQTEQLTDD DVKDNDVMGA WSRDITLTFG LQHPQMVIKR LPLKYSCDRI 360
  361 MEAADLYLSW YRSFVFAADW AMGIPEFRVL PLADQTTLFK QNFMAFGWIT FAYKCFELKQ 420
  421 HLTGMPLGNG AYIPYNDEDQ KKLPERWAQT YGVVCRKLID LIVKAMIELQ ITEEEYCLIK 480
  481 TISLFQQDCI LSEAGQGICS RMRDRLLDAL SAHIEKRYPY HTTSQRMTRA LKISLMLPSF 540
  541 SHIGQVESTL ITQLTAADLH QLSGVPMEIC TAQTTL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle