YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	coq-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVLPKINIV ARQFRKCSMA ATSTSTSSSD NSVASTAFVQ EHVRQMQNDI MVQLIPQDES  60
   61 GAVENLADLN VTSNLGRMTH YYFQQGGKML RPTVSLLMGN ACNSAANRSI SEEYLAMLST 120
  121 ERSGIAAHLS VCQNQYKIGM IAEMIHTASL VHDDVIDEAN TRRGSASVNA VWGNKMSVLV 180
  181 GDFILARATQ ILCSIGKPNI ISVMASIIED LVLGEFMQMS TTPTDATPVD RMKAYIEKTH 240
  241 RKTASLFASS CRSAAILADG SDLKLHEIAF EYGRNLGIAF QLADDLLDFI ATADEMGKPV 300
  301 AADLKLGLAT APVLYACEQY PELNTMLLRK FKHDGDAEKA REIVVNSDGM DKTRRLIDSY 360
  361 SQKAVEMASS LPNRNESTEH LIKLAMSQSD RKF

Type	Start	End	Confidence
Signal Peptide	1	29	0.66
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	393	0.99