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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28764
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKRLLIFA VLLVLPNINA NQEVSFVKHW KDILLTDGEH SPICALSIDG CARSAPYNVS  60
   61 KKIMKASVNA SEKDSIPEKS IDNFDEWTKK RRDAVANQNG QNQKTIEPTQ VARHDEVSIP 120
  121 LPPITRPPRN FASRECGAKI IAANPEAENA KAVVNEKDVD DYMRNPCQSA KEKFIVIELC 180
  181 EAIQIKKIAI GNFELFASRP KTIQVFISER YPPLANWISV GPFHLQDHHK NLQTFDVPNT 240
  241 NVYAKYVRIN LEDHYGKEHY CIVSVVNVMG STLADEYDKE EAAAHLLNVI EEVKEEPVTT 300
  301 PPPSEQKMQT QLPVPPKSPN QTVSARMKSV DFRQLKSVCS QCSVGKVSNL ICHILPIPTR 360
  361 VKKNDLVKPP NNLKTSTIKP AVTDKRDLKT EIGLWAERSR HSNFEQSRRR NLATIQRLHP 420
  421 KDVQKISTAP DVPTPKAENI EKPTEKPSEE VKPPAREQPQ VSLPPKPKSE PILPAGGSTN 480
  481 QRELVLMKLS KRIAAVELNL TLSSEYLSEL SKQYVSQMSG YQQELKETRK ASKKTAQTVE 540
  541 AMMRSKMNGV KRELRDLRQS VYLLQKLENS RYNNVQSEMS RQVLMSSCHI SSNVPPSPTI 600
  601 ARLPLIIPAL NRKLENFTNF EERMKKIYET AKSVMFGSLT WNTDHLIVAL ISFNIMALSF 660
  661 LFAGVFYIHR RNKERCEETQ IIVKNELRAR IAKVGIENRK LISKGMRRAE LAVTAAVSSA 720
  721 LKIEKTSSNR SAMTELETAL ANLFEAQQTR IEEQFEQNQK MLRDALSERN GSRFDDTLSV 780
  781 EDSESSSETE HSKEDTPTLN AD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle