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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mca-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSDDYDCS ISELKLLMEL RGAEALEKVN STYNGVEGLC RKLKTDPING LPNDTKELEH  60
   61 RRTAFGKNEI PPAPSKSFFR LAWEALQDIT LVILLVAALV SLGLSFYKPP AEHASNDSSE 120
  121 SEAGWIEGVA ILVAVLVVVL VTALNDWTKE KQFRGLQSKI ETEHKFSVIR GGEPLDIVVN 180
  181 ELVVGDIARV KYGDLLPADG LLIQSNDLKI DESSLTGESD LIRKSEEFDP VLLSGTHAME 240
  241 GSGRFLVTAV GLNSQTGIIM SLLGAAKEKK DDKKEEPTTL TNGNHMNGLG NGVDKAAELP 300
  301 VPEEEEVGRM SKSVLQTKLS NLALQIGYIG SIVAAATVLI LIIRHCISKY AIEGKSFEAS 360
  361 DISHFVNFII IGVTVLVIAV PEGLPLAITL ALTYSVKKMM KDNNLVRHLD ACETMGNATS 420
  421 ICSDKTGTLT TNRMTCVQQY INSEFYKGNA PKYEQMDPST RDILFNGIVI NSGYNSTVVT 480
  481 PKNPGEQRGQ IGNKTECSLL GFIMDSGRSY EDLRRQFPEE KLYKVYTFNS SRKSMMTVIE 540
  541 LGDKKYRIYA KGASEIILTR CNYIFGKSGK IEQFGPKEAA VMTKNVIEPM ASDGLRTIGL 600
  601 AFKDLVPAGS KKYEYEEEYD GEIDWEDEEK IREGQTVIAV MGIQDPVRPE VPAAIAKCQK 660
  661 AGITVRMVTG DNINTARSIA TQCGIMQPGG DFLALEGKEF NARIRDADGK VNQQKFDAIW 720
  721 PKLRVLARAQ PSDKYVLVKG IIESTVTKNR EVVAVTGDGT NDAPALKKAD VGFAMGIAGT 780
  781 DVAKEASDII LTDDNFSSIV KAVMWGRNVY DSIAKFLQFQ LTVNVVAVTI AFIGACAISD 840
  841 SPLKAVQMLW VNLIMDTLAS LALATEMPTE DLLNRKPYGR TKSLISRTMV KNIVGHAVYQ 900
  901 LAILFAIMFW GDKLIPNTPS GRNAELGSPP SAHFTIIFNA FVLMTLVNEI NARKIHGERN 960
  961 VFKGIFTNPI FCVIWITTLI SHILIVQFGG QWFSTAPLDL TQWIICICCG VGELFWGQII1020
 1021 NCIPASILPK SFRFGKGDVQ PTSIMLSGEY DMPSTASTLP MKDGAAADHQ RAGQSLWLLG1080
 1081 LTRLQTQIRV VKAFQSVNDD SHPNSLTTST ADRLRASYRR LRIARELEQQ KRAGGLRASG1140
 1141 QVYSTETNAK DTSGIRFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle