YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28711
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISQILNAMS IQKGLISGTL DPETLISELL GSALPSELAS INMLHVQQGI EIGLNIPKLL  60
   61 RDAAGDENAK ARKAYEGYNA ILKEIDGMID VKNWSGKADF DKGIAELRKD YVKPKVLENL 120
  121 EKICQNLTSI LNSATLEADQ LSTALEALTS LSTSFNATSD IWMFHEYTST IQAVAPFLKT 180
  181 ARGVEEHLKY KDNLNLTKKE EAAFNKYISI YTNSAVHMFL DLGPLIGKIF APEGHNKSLS 240
  241 LPEFDKVLSD AWIRSVVNSD SLGKGLSRLS AFQSSLLRAQ RRLNFTDVAG GVRSIIEMFN 300
  301 FDVFPGDDHM SAADQECTPL ELRFRAISDL KMFIDEIEVE FNNLTMLAIK LSFFLSGNSD 360
  361 AGQDFLKIHR EHETVVIKKL NETGQLKSLK AHLSMINQQL ELINTFPIHD INVYARYAQL 420
  421 DIGWIYSQHK DELEKYADYF NCLQNNAYLK YKASLSIATK RISDHVYNST YQNSFNNLLG 480
  481 VFKNSTSAVD DMFVMKRHMK AMKNFHTVET DALGEFKDVE SYAENLRLAV QGLEKLSDLV 540
  541 EKKDQLKYVI DNINVLIESV SVMDDVPHLY NLQKIVLLKS EFRMLHLSLE GFEEQATDSI 600
  601 ESIVLEDYEQ LFVQARSIPS IEGDFEAIGN SVGELARLVT NVTVKEILRN VNVSLNSLDL 660
  661 DFTSYRVHFA NVALRELDVF FANFSKKFEK PEELDVRVEQ KERRKAKNPN ERERLDRIPW 720
  721 WFVFGCVTSI LFGALFALA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle