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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28640
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPPKLLGVV LTTALLFHIA LTAKQAVVSR KSKLCGNVEC EEVLFKARVK RVMGINNDPS  60
   61 FLNLAENAII SVVAVKFSDR PDIMEGKLNG EGSNGFFYAG AIDIMPFAEF LRTAITDKKE 120
  121 MLMISQNPAD IGDKRIVGFL HSETDLVRDF NAKNAQAAAE NGLPAPEPIP IPEPAHTGHG 180
  181 HSHGGHGHSH GGHGHSHGHP APTPAPTPAP KPIEEAPKPA EEPVKPADLE MDAEIERLIK 240
  241 EEEERMKNVA EQPPLVLQSL PETPEAQKLP EEPLEPVTPE PIPEAPVPIA QYIQEPTTTP 300
  301 APLEAPAPVE NAPNLPTPTF SVDDLMAQAA RDALNSNSIV PDAPKVEEPE PAPTPAPAPA 360
  361 EDPVVTPAPE ELTTPPPPAP PPPAPAVPEE AQAPTPAPEE APEAQIPAET AQIPPENAVP 420
  421 EAPEEPAPTT TPPPISAGEA EFLKWEEARQ KREAVAAAPY EDAQAHQFVA SPPPHVSSGL 480
  481 IELIRSSLGL GNITDSSVLL VVNLTFVAAS FLVYIIIRSL SSGGESDILD RQAHFDLMNK 540
  541 HKQLQLQLNA KITEIQNLQA NGAAAQRPEQ PNYEPELLAL RQQLAHLQSE LQTAHAQRQE 600
  601 FEIHYHQIRE LAEQKDHQIA QLTEQANDYQ ERLEKSQSEL QELARHVDSA RAELMDSQTS 660
  661 DYGRQQELME KQAELEQIYV KIDNLTAENR DLTDKIAQLQ VSDSLELEEL EELRNKNLEL 720
  721 QEQVKQLKEE LEKEKSVAGS GNSGGWSDID DNEVVEAVQP IETTPISSEN SENLKKFEAE 780
  781 IAELKASLEK TEKELTKYRN LYNEKLTAIS DKENRSQIEM EHKLKNAESD LQEAKRRAEE 840
  841 IGAEKKELSD RLNEMLKNLN QSMQKSAEND KMLTQLREEA FAKEKQLLEH DSVLRKKDDK 900
  901 IRELDAEFKR VKMEYVKLET KSFHDVRKLN MDVEELKTQL SMAGGVTSSR SIPDRLVSPL 960
  961 QEPIWDEPEP ALQRVVLPLD GYSSMRRRST RRSQLPFGAE SPSDQEKKQA APSHRRRSRS1020
 1021 HGRQPPSFHD PYSMNPYLPG SSDSSFMSTS QPQFLPLNRQ HSRSGHLMSN SANGPYSSGG1080
 1081 SNGGRSPPPE MPLLSAIPPP GARKPLGKRP GTGEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle