YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE28621
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSPFIQVLF LFLIIDRLAL AFDVPCAQKL IGSDCLFDEE CYGMNSVCRN SRCTCPTNFE  60
   61 EYDIDERTTI CRLAPAKIGD SCQRDCKPPL LCRDGKCECW GGSIVDGKCV VLCPVGQQLY 120
  121 GVECTRVAHY QQPCEKDSQC VDPFNACIAG TCLCAPGTTR DTERGFCHAT CPDGMHPRQT 180
  181 CRRLFINDID MLENAANTDS CPLGYRCVTY GSPYVGHCCR LRCPYGEPDL SQSCDAGASP 240
  241 DSKCRPLTHF CFTVSEPGWK SSLCCPRPCR DPTPLYVNGQ CLSIAHRGDP CQIDQQCEGG 300
  301 ITMSCTLGSC QCKLGYHENN DERFLTCTKD CTLEEVASND RCLAKVQLGA RCYSNKQCIQ 360
  361 SAECRFGTCQ CRCGYKQVKD QLLGVRCTNP DDPLSIGSIL DRVGDIFGNK QGK

Type	Start	End	Confidence
Signal Peptide	1	21	0.97
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	413	0.99