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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: vit-6
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFIALALL GAALASTHLD RYNSIERNIQ ESSFRAGREY RYLFNGQLSA GLPVPSTPQG  60
   61 ISRLQSQVTL QWTDGNTVRM QLQKTRFATS QQESNSMKML PFERFEEVER MNREHQELLS 120
  121 MPVEFDYEHG LVREIRFAEN DQPWSENIKR AVINMLQVNI LKKEKYEGAE KSDNQEPTFS 180
  181 FTNVERTLEG ECEVLYTVEE IKKEDEQRWA KSINFDKCTR RPYIHHVQTP VCKDCQQTLE 240
  241 QDKMSSTVLN YNITGTSSSF LINSVELRSQ HLFAPISEKH QLVSAFTLNT MELIYAGEKK 300
  301 TEIKQVRNEK TSELVYNQES EWAEQQWAQT GEEKYLRQLP QWTENKVEMI KKMFSLMAKQ 360
  361 IEQGEAELEA AHTVARIVKV LRECNEEQLE QIYRHVAEHK DEKIAEQLRS IYFNTLALAG 420
  421 TRVTIQQFVD KVQSRKNIAP LKASVAIKTL VDMRYPSLAI AEDIARLCES DVSSSFPALR 480
  481 QSCWLTYGAI VNGVCGQTPR VFVQKNGVKM CPRDAKQRIV DKLVQQFESA STRYEKVLAL 540
  541 KTLANAGLDL SVYPLEKIIL NEQHETTIRT QAIESFRRLR TQMPTKIQRV LMPVYLNRQQ 600
  601 PQHIRMSALH QIIYTQPEWS VLSQIGNQLR QERNQQVRAF TLSLLRSYAN NESPCEQTFS 660
  661 SRVQSLLNNI PFSSQEIDRF ESVYGKWSTY SRRHQSGFEA NFASLFTTES VLPTEMMASI 720
  721 EGVLSGEWNQ YFAQIGFTQK NMEKIIKKLL SNVQEKGLEQ IVVRGKRASG SFQPTEFLSN 780
  781 LLEKLRITRR QSSEQDPHAF VYIRHRDMDY AFLPIDADSI PEVVRSMIQG GRLEIGDIER 840
  841 VLAQGIHFSA SNAAFLYETV RRVPTPMGLP VQFTSKMPTI SSIRGQVTFE LEPKNGKSFD 900
  901 GLRLRVQAGP RVASTHVLSL RVICPIAEVG TKFLHQAVLN TPVDTEIRMN WEDKVVIRAI 960
  961 YNTPSEEKRI AMIQSRPVTF TRTVAPDARQ YPEPIEMTYM LPAHKQLSQS LDREYPQIRV1020
 1021 QGTLNRPTSV RIPQWIVDSN VEVYYKPNVE QYEAIFELNL YNNYKMEKNY EKVYKKHNGR1080
 1081 RYLEAEPEYD EEEHREQITK KFEWLQNEKV YQHVAKFEIK PEVVKMEVEA VCNNDFHFCK1140
 1141 TQIRGEELKA TIQYVYPQTP RTVEELKEQK YRQLVVMGEM NYGENTIHIN INGQQSQEQK1200
 1201 KFVKQIEQAP EHETLLEASR LDQYQTVVEY EFEPKPAQYF ARYWNMVQAY LRTQYPWTSR1260
 1261 IETREEPSRK NMIRATINVE PRQRLTVNMT IETPMETTVL ERVELPFRLP TAQIHYQPRN1320
 1321 SRYEQKPVME KIAHHASKQA NCVVKSTKIN TFDQVAYRNQ FTPCYSVLAK DCGSEKSEPR1380
 1381 FVVLMKKINE KKEWKNVKVV YGENEIEMYK TEEGLICRVN GEEIEYQPES EIEKKQYNII1440
 1441 WLNKNTLKFD SDDVTVQFDG VNARIHLSAL YRNQQCGLCG HYDNEKETEF YDAENQENTI1500
 1501 PKFAKSYLYK DSKCNYEREM FEKEENFQRI EKNQEEEKDQ EMNYEESRRE QDDEPTEQVA1560
 1561 IVERQHEICF TQKPVLRCQN GKSQESKKQK TSVYCLPSSN SWARRQMREI RREPLAQWPE1620
 1621 HKLRNLRDQP QMEERTVRVA VDQKCDKFDY 

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