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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ser-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIELFSHSA PPEDPYYVPA NESFATTALT PHFSTTSVWS IRVQLIPTMG IYHFNGVALF  60
   61 LLPVLCLIGL IGNFLVCVAI ATDRRLHNVT NYFLFSLALA DLLVCCIVMP LSIVVEVRHG 120
  121 VWTWSVSMCL LYVYSDVFLC SASIVHMSVI SLDRYLGISQ PLRTRNRSKT LIFIKIAIVW 180
  181 VVTLLVSCPI AVLAMHDTAN ILRNNQCMIF SRYYIIYGST MTFLIPLCIM GVTYAKTTQL 240
  241 LNKQASILSQ KAGDKFNGNG LRRTMPHRKL GYARTYSATV NGTIANGKAI GAHGRTMSSI 300
  301 SNIANGETAD RLGTSRPSIN TNGHKQLQKA STINKWKSRT SNLVTNFANK VGRRSSLQTA 360
  361 TQDLANEHKA TRVLAVVFAC FFICWTPFFF INFLIGFGGE NVQIPDWVAS IFLWLGYVSS 420
  421 TINPIIYTVF NKRFRQAFVR ILRCQCFHPL RDSHQMYSRN FTTTIVPDTY TCSRSNQERT 480
  481 TSVITRDETR SARSSERPEP SRARSEISEE PVARTNGKLT SEKKKISLPS FPRVSSSRDS 540
  541 RATTEASTTD EETKPLIPKS TVPATVINIP EQLINPIKKS LTTIINMPLL DETIPEKAQV 600
  601 HHKSQTLLTS STLNFATFST CPQQPTRSYS CVDCKKAEKM LSSDVSDMMT TSTASTASTV 660
  661 NGAPRKHLTL FNHFDSAIKE TFL

YRC Informatics Platform - Version 3.0
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