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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: abts-3
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPDSDSNA DPFGGSDPPS APLTFRAPPV SNCAKSIIDR KLRKYASETS FATETASESS  60
   61 LEREVPSRSR VFTVKPVGTR TPGGIVLTNG ASNSNSTNNG GVHRSRRRHD SDASGSANSE 120
  121 ATVASGANTP RRCHFRRPKS TSEMHQSCTS ATIHSLESHH NEERRASHVY MIDDDSVHEF 180
  181 EDDDDEYDNV TLMYAKHEKI PMKDFGSEIR ATMDIDHLLN KAVLLLDLQE TSLEEIFAKI 240
  241 IHEMDIQEPE FTSEQVRSVL FTQDAGNQFH ILSRTVQSIC TTGSVGGSFD YDQTWICALC 300
  301 MLNTVQHRHV AIARLSHPTN LGRTMQDLRF IIIVIAPSRA KGTKTALETT RTFATLFADM 360
  361 EIRQRLVMAQ SVEQFRSTLL SAAKELAMDQ NQWRERKSSI HLSHAKEQIF GPEAWYPFRG 420
  421 LVEEFKRRLA IYPSDYLDGI RGHKTVQKLF STVVFLYFAC LLPAIAFGVL NDDNTKGAIN 480
  481 VRKVIIAQAI GGIFFSLFGG QPMIILLTTV PLAIYIKVIF KISQELGYDF LAMYACVGLF 540
  541 CQMFLILYSA TELCSLMKFA TRSAEEMFSL FIAIAFTVES IRAIHNSFKK NYNDCDTSAI 600
  601 SMKAARTALN AFKNGSNADS IVGNITSSMS IGDTGSLCRR DTSILYMLLM FGTLWLGLFL 660
  661 YNFRKTPYLT RSRREWLADY ALPASVLIMS FTGSYAFSDI EKDRFNLRFE FPLIQMADVT 720
  721 SLPPSGYFVC LLLGFSLSFL FFIDQNITSA IVNNNQNKLK KGTSHNLDLF VVALLNMFLS 780
  781 VFGLPWMHGA LPHSPLHLRA LADVEERVSQ GHVHEVIMNV RETRLASLIA HVMILVSMFF 840
  841 LIPYPLQLIP TSVLHGLFLY MALTSLSGNE MFERLLLLIT EQQAYPPTHY IRKVPQRKVH 900
  901 LFTACQLLQL IILCAFGFSP YPFIEMVFPI VCFFFLPIRH TLIPRLIDYK YLDALDGRH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle