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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: bli-3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.91
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSKHVLYIA ILFSSIFGGK GIQQNEEFQR YDGWYNNLAN SEWGSAGSRL HRDARSYYSD  60
   61 GVYSVNNSLP SARELSDILF KGESGIPNTR GCTTLLAFFS QVVAYEIMQS NGVSCPLETL 120
  121 KIQVPLCDNV FDKECEGKTE IPFTRAKYDK ATGNGLNSPR EQINERTSWI DGSFIYGTTQ 180
  181 PWVSSLRSFK QGRLAEGVPG YPPLNNPHIP LNNPAPPQVH RLMSPDRLFM LGDSRVNENP 240
  241 GLLSFGLILF RWHNYNANQI HREHPDWTDE QIFQAARRLV IASMQKIIAY DFVPGLLGED 300
  301 VRLSNYTKYM PHVPPGISHA FGAAAFRFPH SIVPPAMLLR KRGNKCEFRT EVGGYPALRL 360
  361 CQNWWNAQDI VKEYSVDEII LGMASQIAER DDNIVVEDLR DYIFGPMHFS RLDVVASSIM 420
  421 RGRDNGVPPY NELRRTFGLA PKTWETMNED FYKKHTAKVE KLKELYGGNI LYLDAYVGGM 480
  481 LEGGENGPGE LFKEIIKDQF TRIRDGDRFW FENKLNGLFT DEEVQMIHSI TLRDIIKATT 540
  541 DIDETMLQKD VFFFKEGDPC PQPFQVNTTG LEPCVPFMQS TYWTDNDTTY VFTLIGLACV 600
  601 PLICYGIGRY LVNRRIAIGH NSACDSLTTD FANDDCGAKG DIYGVNALEW LQEEYIRQVR 660
  661 IEIENTTLAV KKPRGGILRK IRFETGQKIE LFHSMPNPSA MHGPFVLLSQ KNNHHLVIRL 720
  721 SSDRDLSKFL DQIRQAASGI NAEVIIKDEE NSILLSQAIT KERRQDRLDL FFREAYAKAF 780
  781 NDSELQDSET SFDSSNDDIL NETISREELA SAMGMKANNE FVKRMFAMTA KHNEDSLSFN 840
  841 EFLTVLREFV NAPQKQKLQT LFKMCDLEGK NKVLRKDLAE LVKSLNQTAG VHITESVQLR 900
  901 LFNEVLHYAG VSNDAKYLTY DDFNALFSDI PDKQPVGLPF NRKNYQPSIG ETSSLNSFAV 960
  961 VDRSINSSAP LTLIHKVSAF LETYRQHVFI VFCFVAINLV LFFERFWHYR YMAENRDLRR1020
 1021 VMGAGIAITR GAAGALSFCM ALILLTVCRN IITLLRETVI AQYIPFDSAI AFHKIVALFA1080
 1081 AFWATLHTVG HCVNFYHVGT QSQEGLACLF QEAFFGSNFL PSISYWFFST ITGLTGIALV1140
 1141 AVMCIIYVFA LPCFIKRAYH AFRLTHLLNI AFYALTLLHG LPKLLDSPKF GYYVVGPIVL1200
 1201 FVIDRIIGLM QYYKKLEIVN AEILPSDIIY IEYRRPREFK YKSGQWVTVS SPSISCTFNE1260
 1261 SHAFSIASSP QDENMKLYIK AVGPWTWKLR SELIRSLNTG SPFPLIHMKG PYGDGNQEWM1320
 1321 DYEVAIMVGA GIGVTPYAST LVDLVQRTSS DSFHRVRCRK VYFLWVCSTH KNYEWFVDVL1380
 1381 KNVEDQARSG ILETHIFVTQ TFHKFDLRTT MLYICEKHFR ATNSGISMFT GLHAKNHFGR1440
 1441 PNFKAFFQFI QSEHKEQSKI GVFSCGPVNL NESIAEGCAD ANRQRDAPSF AHRFETF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle