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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28394
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKEPGVAK SLCIAAVITG VFMLFILVVI LAFSAGGSSG ESLYDKDDPI LELDVDTFSA  60
   61 AIYGSKKAHF IEFYSSWCGA CIGYAPTFKK FAKQLEKWAP LVQVTVVNCA DDKNMPLCRE 120
  121 HSVSSYPSLR YFKYNSHNKD DGMKYSGDKY DINKLAHDIA GLAQADAQKQ NPESWPTFLP 180
  181 LSDTTTLEEV FKSIGTTSYL AIVVQDSPSV IAWANLINYH GNNGVKVAYV TQNHPIATKF 240
  241 FSDGGVHALL FSNGNQEPLW KSSSPVDKWV DVQDKIDELI GDKIAASGPT VHPINAAPVI 300
  301 AAPSNPLNNQ YEVQLVDLKS AMSYMLYKEI PRREEIRDEP MAVLKQWMHT LKKYAPGTTP 360
  361 MRRLFFRLDE WIQLQSVVTA NEWITKVDEI QQALGNPLPK EITWMACAGS KPNLRGYTCG 420
  421 LWTLAHTITV EAYKQEKHNT AFKPVIDVLE PFRAFIFHFL SCSECAQNFT KEAEKNQLHL 480
  481 VTRPEDVYAW LWRVHNFVNK RLSGSLTDDP SFKKQQFPPK SLCADCYDAN GDIDEAKALP 540
  541 FVFKYYSNIK TDSTDNLPGY KVVEYKEGKT LSAGQRHLNP KFQVHAGKVD QLEANDKVKN 600
  601 VLDASPQRTW KDIDGYDGLP DSGRSHYYFI FLSLIGVALI VIYCKYRKNR SKFWKTFYYK 660
  661 NDFKLCPWSS SPVKQNIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle