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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-4
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTVASRFS WGLILASIDF LACLLFACLH DGTFKFANFT SQFGDFSFFT STIDLFLLQF  60
   61 FRFALWMVPA AIHVANKADT LTMWKEPIFC SALLICAASP TKLLLLTEKL KPDEFLTFGD 120
  121 TAFLVWNFIS AIILNSSWTR YFSRTPSSYI ILEDEDLEVA PKQTFELIFR LLQYCKREWL 180
  181 WHISGFSWLF IYSITRIFVP YYTGQVIATV VATKSYPALS NAVYIMTIIS LVSAVAAGFR 240
  241 GGSFEYAYAR IQRAIRYDLF HGLVKQDVAF YDAHKTGEVT SRLAADCQTM SDTVALNVNV 300
  301 FLRNCVMLLG SMIFMMKLSW RLSLVTFILV PIIFVASKIF GTYYDLLSER TQDTIAESND 360
  361 VAEEVLSTMR TVRSFSCENV EADRFYGKLT HTLDVTRTKA IAYIGFLWVS ELFQSFIIVS 420
  421 VLWYGGHLVL TQKMKGDLLV SFLLYQMQLG DNLRQMGEVW TGLMQSVGAS RKVFEYIDRE 480
  481 PQIQHNGEYM PENVVGKIEF RNVHFSYPTR SDQPILKDLS FTVEPGETVA LVGPSGSGKS 540
  541 SCISLLENFY VPNAGQVLVD GVPLEEFEHH YIHKKIALVG QEPVLFARSV MENVRYGVEV 600
  601 ADTEIIRSCE MANAHGFIMQ TTLKYETNVG EKGTQMSGGQ KQRIAIARAL VREPAILLLD 660
  661 EATSALDTES EHLVQEAIYK NLDGKSVILI AHRLSTVEKA DKIVVINKGR VEQIGNHETL 720
  721 LKDTNGTYAK LVQRQMMGDQ KPRKRPAVAR SGPQPAASIN VAGPSQGNAM SLLSTSFSQS 780
  781 ASSVTSH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle