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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE28206
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFPILDYAVY FKEIPNFPLL GGDMGLPLLT GDYSDIGDIQ EDDYQQEEDD AEEVVKDSTI  60
   61 APRGKRDVDF ESDGVKVQIR EKRSTMVIVT RDDVTNSTTI REFAFQNVNT TERCVTLSDL 120
  121 RSSTRYIVYV TARNEYGTSV PSVRNIASTN VHMVKNNASL PDSMKCCTDA NVTSFCSSKM 180
  181 CNVAEDPSSF STITIATTCR AEWPKVSPCI ADGRNHTDCC LKKGVQHDCL EICSGSTKEL 240
  241 GVHSVLCLNL DLQAIYQCIR QGYETHPSAP GNVTISELTA HSVTVQWTEP NSNAHLVENY 300
  301 TLFIRKNEHG EAVRTVKNVI SPHVELGLDP DSEYVLTLQS HSANGTSLPS TAKLFSTLPT 360
  361 TRPPLCTIGE PIYMNDGRVM ICDAVNPCPN GFRCTGAGSD LSYCCPHDGT HSSEEFTSCC 420
  421 KEQKMPESCM SSCQYNMTLP ESCKENLNTW VQCASEGHDH LRCCLQEEVS KPCQTACMHP 480
  481 FTVPADECFS EVSKYRTCFS AAHQALPAAV RNVEVSSISK DSATISWEDL EANIIVFRVQ 540
  541 LFEKGGNLIK TENSSADIFR FIDLEPNKDY SVRVTAINFL GEGPPSWNAT FTTKPAQIYE 600
  601 GDRPVAPEKL RISWNSGPRV NVTWDPVSVR RNAEVVTKPI EYTIYYLDTE QSSTWTTLRT 660
  661 NQTWVVMRDL RKDALYYVYV TAKEDNRTSR SSSIITILAQ KDSPGLPEPT IVIEPDHKDG 720
  721 VFSPGEKISI NCSLPNIKKH LNIDLTVGSH VVQNDHGALW VILETEADEA MDTATCAVSD 780
  781 TDGRQHVAMK HLVLERKASV TMKKDKIRVL DDQSVEIECI YRGGGLDPKI SFEKDGKKAS 840
  841 RGFLNLKKTE AGYVAKWHIR KVKQEDAGFY KCVVTSSDGS RVEASSEVIF STETLPVNPK 900
  901 LILQCCEDEG ITGDCLQACN IGRTSLSIKN QNCTRFAVSL LKCASDIRDH SDCCIASGVT 960
  961 SKCLPLCSGD SFSPDIDCSE HAVSIMTCSV KSHEHAPSEV SNVRIKASEG KVNIEWDYPL1020
 1021 TKDYKYFAVY YRKAHDDHED WHKLKTIQQN IELDVDPSED YEVGILAANA LGHSRLMYSA1080
 1081 IPKDSEPRRS ASKGSSSAFW IVVILVVFGV LIAGLAVLSK RRELPYPIGK FIGRRNDPNQ1140
 1141 PTVAFENPAY GEPWGGAEVE IRGLGGSATT GTAAATQSEW QSANLEANST TDNSHEYRNG1200
 1201 MRYAKLET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle