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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: mua-3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.84
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAGISIFFL FLHIPIFFVN CSNSTSCVAR EEFQCKMDDS CISMKKWQDG VDDCYDGSDE  60
   61 VCLPWQFDCQ FGSPRCISKN KLHDKKIDCY SGFDEGCPAH YFVCRDRSAC IEPSKYLNGV 120
  121 ADCKDKSDEP CAQNQFQCSD GTKCIPKAQF QDGKEDCDDG SDEECTTSQF ACQCGTIKCV 180
  181 SDTFIMDGNW DCEDGSDEFI NKTLTANCTR NNKVNIATNS LSLGKLKFCS GKNPCKPELG 240
  241 QVCVIIGGTW RCVCKLGTFR PLGSDKCIPI ELLTRYRNAP SSKCSNSHEE QFGLLQGFQK 300
  301 SLSSRKELER WSNIRRAPPR TLSGTTPSGS DGFLKSGAEQ VPFMFQEDKN YVSVIPDEII 360
  361 DSYGTIMTPP EFHFNRDDIR CGNKTCGLHE SCQKNSESKY ECICREGFTI FEGTCRELID 420
  421 ECAQGKHDCH PEARCVDALI GYECLCREGY LDTSIDPKAR PGRKCRKLIN ECTNALMNDC 480
  481 SQNARCLDKP IGYTCRCQDD YVDVSREGAR KPGRNCTQAI NECASNLHNC DTHAICQDQP 540
  541 VGYSCRCPFG FIDSSPTALE PGRKCVQANN EAATTSTTTS QCIKEKNGET VCKCLLGYKN 600
  601 VGTKTHLNCQ MEKRANPCQD YSLHDCDPVA ECFSEQPGYF QCQCPKGFTD SSADKRFPGR 660
  661 KCVRAVDECA LGRHTCDPHA DCIDTHQGYT CKCRSGWSDT SLDPLRSPGR SCKKADMCSN 720
  721 IDCAAEAECR ETPIGPMCQC VSGYVDVSRQ HGRPAGRVCR AVVNECAEGR HDCSSHATCI 780
  781 DTADGFTCRC KDSYRDESSD TLKHPGKNCV RTVQPDPPEC DVSDPMSCDP AKREVCIFVE 840
  841 NTYKCRCANG YSRLPDGRCV VINECAEPRL NTCGKNAECI DLAEGYTCQC RSGYADISPV 900
  901 SQPGRICRAR VNECSNKEKY NVDCSENAIC ADTEHSYSCR CRPGFADVSA AFNKLPGRRC 960
  961 IEAVNECASP SLNDCSKNAF CEDAKEGYIC TCRPGYVDNS PNAARHPGRI CTKPVEKIKT1020
 1021 DLKDTSFSTD DGCDPKNPKC GANEACVQRH GQHNCECVET AFRYTDGSCR VYSACSKRNT1080
 1081 CDKNAICLNR FDSYTCQCRP GYIDLSADLT NAPGRICKEL INECASSDNE CSPYARCIDA1140
 1141 TNGYACQCLD GFIDVSSRYN KPPGRQCTNS NNECSEKSLN TCDENADCVD TPDGYTCQCY1200
 1201 GGFVDVSSNA NLPPGRVCTV QTTCPKQKTD LVFLIDGSGS IGSYVFKNEV LRFVREFVEL1260
 1261 FEIGRSKTRV GLIQYSDQIR HEFDLDQYGD RDSLLKGISE TQYLTGLTRT GAAIQHMVQE1320
 1321 GFSERRGARP QQSDIARVAI ILTDGRSQDN VTGPADSARK LSINTFAIGV TDHVLASELE1380
 1381 SIAGSPNRWF YVDKFKDLDT RLRSMIQKAA CPSPTKQETP SEDVCNPRTQ TGCDRSLNEH1440
 1441 CAVENGRPRC VCPEGFTRHP FTRVCGGDLC NPQLITSCIF PEECQITPYK NFRCSCPEGY1500
 1501 NRDYRSGFCV SVKEVQISPQ HDANCHNGGV RCSENERCTN DGSDWFCECL PGFERIRNGQ1560
 1561 CAYPGSCNPN DPMSCDVRKR QQCLPRGNIY TCQCGRNEKR HPITDICLKN ECLTGEHDCD1620
 1621 RSARCIDTDE SYICACQSGF IDHSPNPSER PGRVCVALQN ECLDGSNRCS PNALCTDTEE1680
 1681 GYVCRCKSGF VDYSPNPQTF PGMVCKELVN ECTNPRLNQC DRNAHCIDTI EGYSCICKPG1740
 1741 FVDMDEFGNP GRRCEQIKTN DKCSPGKNDC DRNARCIQIG DDDYSCACPP GFKDKSPSSS1800
 1801 RPGRLCIPVI PECDNPTLND CDSPDRAVCT DTDDGYMCRC RQGFLDISPS ISVKPGRLCK1860
 1861 PLQNECALGI DDCARDGGIC EDNPDSFTCR CAMNYLDVSF DRVTRPGRKC KRLINECQTG1920
 1921 QNDCSEEATC TDTEDSYICA CPQSHIDLSP DTVNRPGRRC LMRINECTSN RHDCSPNADC1980
 1981 IDTPESYKCR CRDDFVDESP DSSRRPGRIC RPALVDECRT GKHDCHVNAI CQDLPQGYTC2040
 2041 QCSADFVDVS PHRASHPGRL CQPRPTPPPP ECRLDGGNQC KVHLNEVCRL MGGEPKCSCP2100
 2101 VNYQRDSSGS CSIINECLFT QLNDCHTAAD CIDQVQGYTC QCRDGFKDIG DRRRPGRMCK2160
 2161 PMVNECQYPH LNDCHQNAAC IDLEEGYECK CNQGFMDHSH GRPGRICKQL TNECLRPSLN2220
 2221 SCDRNARCID KEEGYECECR DGFIDVSPSP TLKGRACREL VNECANSRLN DCDKNARCKD2280
 2281 TMDSYECDCP VNSKDISPSP SFPGRVCLMF INECESGVHD CDPSATCRDN EQSFTCECPS2340
 2341 GFVDRSPNKH ARPGRVCVKL VDECREGRHT CSSHADCRDL EEGYTCECRD GYVDRSPNLA2400
 2401 SQPGRVCSAP EVCPPNHDCS SAAVCEPLGG MKYQCVCIQG YVDQSPGSQK GRVCVRNNAC2460
 2461 HDPRLNTCSR NAICYDEPRG YRCECKRGFM DRSPDSSQRG RVCEPPPPPS PPPRHPCQDP2520
 2521 ERNDCHPAGT CRATGAQSYT CECLSGYADR SPDPRNKPGR LCVLTEPVCL DPEQNDCHAA2580
 2581 AICSEVNGPE KYTCKCRDGY TDESPDPLRR PGRICKGLIN ECLDRSLNDC HSLAVCKDLP2640
 2641 NGYTCQCPIN AKDQSPDPRK PGRICSLSVN ECANPSLNSC SAFADCFDEE NGYRCRCRNG2700
 2701 YHDDDPAHPG HRCSFMINEC DSSNLNDCDR NANCIDTAGG YDCACKAPYR DEGPPQSPGR2760
 2761 ICRLNECLNP NRNTCDRNAD CRDLDYGYTC TCRHGFYDQS PNPQEPGRIC IEFQQEEHIE2820
 2821 RVKVTTVQSE PRREFPCGRD DCIKARGEVC ISGEYCGCKP GEGRSASTGK CQEVQETPFE2880
 2881 LRVVTRDQRP LMYSTEFGSQ KSPSYVEIVE LFEKNMARTF GGTSLAPRYV NTKVDYITHP2940
 2941 KTKNSSWDQG LLFKYEVQTT KSQSQPIDEC ELWKQMQASL DRTNGAIGGG SLRVASDTDL3000
 3001 LNPCKQQEEW GNCGGMSCKE HLKEVCIAGH ICGCPDGMKR RDANSECRVV ESWNVPLWVV3060
 3061 RDKEKPIVFS ESFDNPQTPV YKDYSKRLEK GIEGCYPHTE LKNAFVTAEV NDIVNPVLMN3120
 3121 ASYDTGLLFN TTVHFRKGMV HVPSDAYYQL IKYVTKENNN EVGDSELYLN PTQPDPFNPC3180
 3181 FKNDCDPHGK CIEISKYAYK CECGVGYRDI NPQSPGKKCL PVHGFNECER KEDNECSENA3240
 3241 RCIDLEHLYK CECLPSYYDT SPVGSVPGSL CVLDYCSDVN FCPTNTTCKN MEQQAECKCD3300
 3301 AGFMDIRKSE KRTALMLGDD TLCMHVRDVD ECALGLNNCS GVAHCIDRAV GYTCKCPDGY3360
 3361 IDGNPDEPGR VCGALLCDLC NAHGDCVHNT ATNNITCVCT DGWTGPQCQV APSNASLVLL3420
 3421 ILLALLFLLL TLCCLLYFCT KCHCFKGRRF AGAGANGFGY RRGGAWPWST LEGSASSESG3480
 3481 AEFSAMSAAG NDYYPDIGIP RAKLKSGMMA SGNTAEVRNM EVARLDQYLD ENAVRIPRAH3540
 3541 LVDAHGDTSF DSLSEASSEY TIKEEIERKV ITDVTTKEIK TTTTTDEQGN TIVTTTEAVH3600
 3601 PRDTTIVHGG GYTQNESSSS SFSGGERAYQ SQSQQQQSMS QGMSQSMSQH ATSAGYSSSG3660
 3661 MESSAHNSGY ASIRHTGERE RGGSEEEFSI GRARGMAAAS SGYQHSSSEN REVEEYCSEE3720
 3721 EDVEHSVGDK RTIVTKNHSY EPFVNGESER FKTEVVTSQT STHVTKK

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