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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: lin-3
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKMLLFCIL LLFMPQFTVS ESCLPSWFRQ ERSAPEQLQS AENAAENSGS VPPDTSRNSL  60
   61 ETNEIGDAPS STSTPETPTE TTISEAGDDE KRTEEVAKEL IEKEAEYEGE YEDEKVDEEV 120
  121 EEALKYNEDA TQDATSTLKP AVRKEIEKLK EAKCKDYCHH NATCHVEVIF REDRVSAVVP 180
  181 SCHCPQGWEG TRCDRHYVQA FYAPINGRYN VRLSTMSSTA QLLVQQSSTS AIPAFAFLIV 240
  241 MLIMFITIVV YAYRRMSKRS DDMTYTMSHM CPPEAFNVLK TPNGRHIPVH QIPSCSYTIP 300
  301 TPGTVPPNIS STPGSRIPTR QQAIRNNEQA RNNFFSILRS QGTIPSRSIN DDDTPKHYKS 360
  361 VPRVEVSAIN YSGHIDFSTV SYQSTESEVS KASVTCPPPA HTVINIELDS ADTNFRSPSR 420
  421 SSGEQGSPAT CEPMIRHT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle