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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-84
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.28
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPATEADNN FDTHEWKSEF ASTRSGRNSP NIFAKVRRKL LLTPPVRNAR SPRLTEEELD  60
   61 ALTGDLPYAT NYTYAYSKIY DPSLPDHWEV PNLGGTTSGS LSEQEHWSAA SLSRQLLYIL 120
  121 RFPVYLVLHV ITYILEAFYH VIKITSFTIW DYLLYLVKLA KTRYYAYQDH RRRTALIRNR 180
  181 QEPFSTKAAR SIRRFFEILV YVVLTPYRML TRSNNGVEQY QYRSIKDQLE NERASRMTTR 240
  241 SQTLERSRKF DGLSKSPARR AAPAFVKTST ITRITAKVFS SSPFGEGTSE NITPTVVTTR 300
  301 TVKQRSVTPR FRQTRATREA ITRALDTPEL EIDTPLSTYG LRSRGLSHLN TPEPTFDIGH 360
  361 AAATSTPLFP QETYNYQYEE ATGNKIKTAF TWLGYLILFP FFAARHVWYT FYDYGKSAYM 420
  421 KLTNYQQAPM ETIHVRDINE PAPSSSDVHD AVGVSWRIRI ADFLSSFVAT IVEAHQVVFA 480
  481 MFKGGIVETV SYFGGLFAGL TDKKSSKFSW CQILGLLLAL LFAIFLLGFL TSDNTAIRVK 540
  541 EITKDKNASK KSEGSLPAVP IWISAANHVK HYTWMVKEFV VDIAFDTYNY GKSTIGRLGT 600
  601 TPRYAWDLIA SGCGAVGNGL KSVLSSSFRF IDFCAGKLFY YGSDGFLSAN KSIGTFFNGC 660
  661 YETLYNGCTA IVGHTKSFIY NASNAVYNFF STIFAGLLNF STSSQNSILS LLKSFGTGIT 720
  721 NIFYNFIYAP IAGVFNFAGD NYMYFFNEVA AVFGKVYNSV VSVLKTVINW ILFLIAYPFS 780
  781 LCTRAWIRIS QYAPEDVVQV IPIPQAITPT PDVERIVEEP LRKVTDVEDE ELVIIPAPAP 840
  841 KPIPVPAPTP APVIIHQTNV VETVDKDAII KEVTEKVTN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle