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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kqt-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEESGSSTD QAAPSDEQQE AGSSSAIGQE SRKTVVFQEP DIGFPSEHDQ LTTLHDSEEG  60
   61 NRKMSLVGKP LTYKNYRTDQ RFRRMQNKMH NFLERPRGWK AATYHLAVLF MVLMCLALSV 120
  121 FSTMPDFEVN ATIVLYYLEI VFVIWLATEY ICRVWSAGCR SRYRGISGRI RFATSAYCVI 180
  181 DIIVILASIT VLCIGATGQV FAASAIRGLR FFQILRMLRI DRRAGTWKLL GSVVWAHRQE 240
  241 LLTTVYIGFL GLIFSSFLVY LCEKNTNDKY QTFADALWWG VITLSTVGYG DKTPETWPGK 300
  301 IIAAFCALLG ISFFALPAGI LGSGFALKVQ QHQRQKHLIR RRVPAAKLIQ CLWRHYSAAP 360
  361 ESTSLATWKI HLARELPPIV KLTPNGSNNA TGLINRLRQS TKRTPNLNNQ NLAVNSQATS 420
  421 KNLSVPRVHD TISLVSTSDI SEIEQLGALG FSLGWKSKSK YGGSKKATDD SVLQSRMLAP 480
  481 SNAHLDEEEA VGYQPQTIEE FTPALKNCVR AIRRIQLLVA RKKFKEALKP YDVKDVIEQY 540
  541 SAGHVDLQSR VKTVQAKLDF ICGKNIEKIE PKISMFTRIA TLETTVGKMD KKLDLMVEML 600
  601 MGRQASQRVF SQNTSPRGEF SEPTSARQDL TRSRRSMVST DMEMYTARSH SPGYHGDARP 660
  661 IIAQIDADDD DEDENVFDDS TPLNNGPGTS SC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle