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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-8
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPLLTWNLI CVSSRWYTIL CLKNKVKFWL GTRLVHEPES MESRSSPYIR PSPYAGGVHP  60
   61 HFEEEDDRSK LHASALYSER RTSSRKSLRS QKIDYHTTTI KSLWFDFCAR TSSHGIPYVA 120
  121 TSSFFGRYVW AALFMCMLMA FLLQTYWTMS EYLQYRTIIE MQLQFEAAAF PAATVCNLNA 180
  181 FKYSELTQYE EIKEGFDYWE RVINARMMSD SMKPGGDILE AISVRKKRSK SRDQLLFPID 240
  241 DEDLEGAVYQ PVFVRCTCMN MEQCVPNRNP LEVNASICMC FEDVTRGLIW PCYPTSVWTV 300
  301 KKCSGCSISN TCPDPDGPNA SKQIAKHNSP LPCLCQSISH HCMVHPKDEI RWWNPNNYTV 360
  361 YSVTEPPTTE ITETEEAFGL SDLKDAGAIT TQTKENLIFL VAALPRETRR NLSYTLNEFV 420
  421 LRCSFNSKDC SMERDFKLHV DPEYGNCYTF NFNDSVELKN SRAGPMYGLR LLLNVHQSDY 480
  481 MPTTEAAGVR LVVHEQDQEP FPDTFGYSAP TGFISSFGLK TKELHRLSAP WGNCSDTFRP 540
  541 VPYIYNEHYS PEGCHRNCFQ LKVLEICGCG DPRFPLPSEE HRHCNAKSKI DRQCLSNLTS 600
  601 DSGGYHHLHE QCECRQPCHE KVFETAYSAS AWPSQNFKIG TDCPAVSDIF NDTEACTEYY 660
  661 RQNTAYIEIY YEQLNFESLK ETAGYTLVNL FSDFGGNIGL WIGFSVITFA EFAELFCEIC 720
  721 KLMYFKGIVY VQKKMQGKEY TSSSLMHIDF LQRSPKKSQP GEDEVSTNES TKELMSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle