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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: cua-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENVSLLDG SPLPSRPSTS SIPRPSPSKN IQLLVDFGAP KTDGNVQETM LEIKGMTCNS  60
   61 CVKNIQDVIG AKPGIHSIQV NLKEENAKCS FDTTKWTAEK VAEAVDDMGF DCKVLKKEPP 120
  121 TQMAEKPKIR RAIVSIEGMT CHACVNNIQD TVGSKDGIVK IVVSLEQKQG TVDYNSEKWN 180
  181 GESVAESIDD MGFDCKLITD QEIAAVEPQK ASTTKLSISP LKTVDLSDGK VELQLNGVKY 240
  241 SKEGSSDHLE KCTFAVEGMT CASCVQYIER NISKIEGVHS IVVALIAAKA EVIYDGRVTS 300
  301 SDAIREHMTG ELGYKATLLD SMGANPNYSK IRLIIGNLST ESDANRIESH VLSKSGIDSC 360
  361 NVSIATSMAL VEFSPQVIGP RDIINVVESL GFTADLATRD DQMKRLDHSD DVKKWRNTFF 420
  421 IALIFGVPVM IIMIIFHWIL RTPMHPDKQT PIFTPALSLD NFLLLCLCTP VQIFGGRYFY 480
  481 VASWKAIKHG NANMDVLIML STTIAYTYSI VVLLLAIIFK WPSSPMTFFD VPPMLIVFIA 540
  541 LGRMLEHKAK GKTSEALSKL MSLQAKEATL VTMDSEGRLT SEKGINIELV QRNDLIKVVP 600
  601 GAKVPVDGVV VDGKSSVDES FITGESMPVV KKPGSTVIGG SVNQKGVLIV KATHVGNDST 660
  661 LSQIVRLVEE AQTNRAPIQQ LADKIAGYFV PFVIVLSLFT LGVWIYIEYN SARNANLPPG 720
  721 LRFEEALKIA FEAAITVLAI ACPCSLGLAT PTAVMVGTGV GAANGILIKG GEPLESVHKV 780
  781 TTIVFDKTGT ITEGRPRVVQ IASFVNPSTM SLKLITFLSG ATEALSEHPI GNAVAAFAKQ 840
  841 LLNEPTWPNT SRFHVSAGHG VTCRIDSIRQ SFSSLALSGS TCEIPRLPDG QTITIPGTEV 900
  901 NLLQVSSKEV SQPNPDTANI VIGTERMMER HGIPVSEVVK MTLSEEQRKG HISVICAINA 960
  961 EVVAVISIAD QVKKEASLAI YTLREMGLRV VLLTGDNSKT AESTAKQVGI DEVFAEVLPN1020
 1021 QKQQKIKQLK GYKNKVAMVG DGVNDSPALA EANVGIAIAA GSDVAIESAG IVLVRNDLVD1080
 1081 VVGAIKLSKM TTRRIRLNFL FAIIYNAIGI PIAAGVFRPF GFMLQPWMAA AAMALSSVSV1140
 1141 VSSSLLLKNF RKPTIANLYT TSFKRHQKFL ESGSFQVQVH RGLDDSAVFR GAASSKLSIL1200
 1201 SSKVGSLLGS TTSIVSSGSS KKQRLLDNVG SDLEDLIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle