YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE26156
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	10	0.92
Transmembrane Helix	11	32	0.90
Non-Cytoplasmic	33	51	0.93
Transmembrane Helix	52	73	0.92
Cytoplasmic	74	80	0.75
Transmembrane Helix	81	98	0.96
Non-Cytoplasmic	99	103	0.81
Transmembrane Helix	104	124	0.93
Cytoplasmic	125	143	0.92
Transmembrane Helix	144	162	0.97
Non-Cytoplasmic	163	175	0.83
Transmembrane Helix	176	197	0.91
Cytoplasmic	198	226	0.96
Transmembrane Helix	227	248	0.89
Non-Cytoplasmic	249	263	0.87
Transmembrane Helix	264	287	0.92
Cytoplasmic	288	296	0.86
Transmembrane Helix	297	318	0.93
Non-Cytoplasmic	319	332	0.93
Transmembrane Helix	333	355	0.89
Cytoplasmic	356	374	0.86
Transmembrane Helix	375	393	0.95
Non-Cytoplasmic	394	399	0.69
Transmembrane Helix	400	419	0.94
Cytoplasmic	420	433	0.95

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGISRETVN MLRVSTSFLI LFSAVLSHEF IAEPLFHGLS EANIGGIQAR DGYLMLCILY  60
   61 FTNTVSCFFA PFVVSRISGK WAMVLGMVAA FCMQAAYMFP NRYILMVTSA LGGAGATLLW 120
  121 VGQGQYITEN ISEANREKNT SIQWGFYKMS LIFGGVFFFF YFQNSSIDAI VANGQMQIFF 180
  181 IVFMTFTVLS IINSIFLPQS QVSQNQAILP FCETFVNSFK LLKTPRMFCF TIFFFYTGLI 240
  241 RSFWISIYPA CIKFTSQLST NTTAILTIGM IVTGCGQVIG SLSVAVIGNK IRKFGQHTLI 300
  301 LCALILHIFL CVMISLTFPN DAPLGHTDKN GPVFGASVLS AMTISALLGF GDAILQTQVY 360
  361 SYIAKYYQNE SSTVFSIFRF SSGIASTLLF FAAQYFHLMH HLILIAIFAV LSGLAVLRFQ 420
  421 KSSAAVSEKQ SEI