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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: che-2
Protein type: Globular with Signal Peptide
Type Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKLSASRK TRHTEMVCGV GWIGTEAILS AADDHVFLLT NTATNESQQI LNMPETFFPT  60
   61 SLHIFPRSQT KGGQNDVFAV STSDGKINIL SRNGKVENMV DAHNGAALCA RWNSDGTGLL 120
  121 SSGEDGFVKM WSRSGMLRSV LAQFATAVYC VAWDSTSSNV LYCNADHCYI KSLKMQVAPI 180
  181 KWKAHDGIIL CCDWNPTSDL IVTGGEDLKF KVWDGFGQIL FNSSVHDYPI TSISWNTDGT 240
  241 LFAVGSHNIL RLCDKSGWSH SLEKMNAGSV MALSWSPDGT QLAVGTAAGL VFHAHIIDKR 300
  301 LTYEEFEIVQ TQKTVIEVRD VSSEVSRETL ETKERISKIA ILYKYLIVVT SSHIYIYSSK 360
  361 NWNTPTMIEY NERTVNIIVQ CEKIFLVSDG MTITIFTYEG RKLINLNPPG QVMALLDERK 420
  421 IDLANDTLVV RDRADNKVLH FFDPTTGKAQ GDGNLKHEHD IVELTVNQCG PLNDRNVAFR 480
  481 DQIGAVHIAM VKTFGVSQRM VKIGSLVEQL VFNDVTNMLC GISEGKIAVW PLPNVAFHDR 540
  541 NLLQKSLIQK NIGSVGKFPQ LANFAGNTIV IRKSDGCLLP TGILPFYGTL ITMASQSKWD 600
  601 QAIRLCRSIG NDTMWATFAG LAVLHKNMIV MEIAYAALED DEKVSLINEI KDKTDKETRQ 660
  661 AMQVVLTGKL ADADVLLERS GLSFRSLMLN IQMFKWKRAL ELGLKNKQWL EIVMGYREKY 720
  721 LKNCGQKETD PLFLKHMSEV EIDWVHIREL IAAEKAKGNN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle