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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACS_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIGSPSSPI LSVVSSSGSL DPKISGSLGS RILPATQRSS PSENLLLHRK MSSNSLRHVE  60
   61 SMSQLPSGAG KISQLNAVVL GESLASEEND LVFPSKEFSG QALVSSPQQY MEMHKRSMDD 120
  121 PAAFWSDIAS EFYWKQKWGD QVFSENLDVR KGPISIEWFK GGITNICYNC LDKNVEAGLG 180
  181 DKTAIHWEGN ELGVDASLTY SELLQRVCQL ANYLKDNGVK KGDAVVIYLP MLMELPIAML 240
  241 ACARIGAVHS VVFAGFSADS LAQRIVDCKP NVILTCNAVK RGPKTINLKA IVDAALDQSS 300
  301 KDGVSVGICL TYDNSLATTR ENTKWQNGRD VWWQDVISQY PTSCEVEWVD AEDPLFLLYT 360
  361 SGSTGKPKGV LHTTGGYMIY TATTFKYAFD YKSTDVYWCT ADCGWITGHS YVTYGPMLNG 420
  421 ATVVVFEGAP NYPDPGRCWD IVDKYKVSIF YTAPTLVRSL MRDDDKFVTR HSRKSLRVLG 480
  481 SVGEPINPSA WRWFFNVVGD SRCPISDTWW QTETGGFMIT PLPGAWPQKP GSATFPFFGV 540
  541 QPVIVDEKGN EIEGECSGYL CVKGSWPGAF RTLFGDHERY ETTYFKPFAG YYFSGDGCSR 600
  601 DKDGYYWLTG RVDDVINVSG HRIGTAEVES ALVLHPQCAE AAVVGIEHEV KGQGIYAFVT 660
  661 LLEGVPYSEE LRKSLVLMVR NQIGAFAAPD RIHWAPGLPK TRSGKIMRRI LRKIASRQLE 720
  721 ELGDTSTLAD PSVVDQLIAL ADV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle