YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24801
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQLKPRVSA LTRLSAEVRS ASQWIKASNS KTPDDINVEK LFVEKEVQKL LTDLTEIDLE  60
   61 HKVFRPRRTS IQQRSHFALM TEERLEKTRE RMREEARRFL QFVPVKEPRE ESVQILAKDL 120
  121 ELKDFDTSKF VFTDITFDAT DQDRTVVVRE PDGTLRTANP EEHDRMNRTY YQKPNRSVNP 180
  181 PPLFSDPNLQ NALDKNDHEF VLDWACWFYE PDDPAYVRLS QLVFDRINES GKFHVVTSTR 240
  241 HFGPFTFYLA LNDNIQKLLN YFGGLGRLSD CANLVRLQKA VRPDWRVTIA QGDSDEKIVK 300
  301 DFAKQNARFR DEIQDLLNFI NNGKLKSDQE QTEHVRERFG VRVDKRKARI TSANIRGADG 360
  361 PLGDLSSEYS VKVVKSEGSG REGGGGEENK KDEGGRGGGK GRWRSREKRS DDDGKKKE

Type	Start	End	Confidence
Signal Peptide	1	20	0.55
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	418	0.99