YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE24542
Protein type:	Globular with Signal Peptide
Type Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGKTLLRRI ACSNLNLKSR KLSGKPRLAI VGSGPAGMFA CNGLLRKSNF SVDVFENSPV  60
   61 PFGLVRYGVA PDHQEVKNVI NTFDAMFEKN RERLKLFCNV NIGRDITFDE LTRGYDAVLL 120
  121 AYGSYKTRTL DIPGSDASNV ISGSEFVGWY NGVPNASTPD LTTSNVVIVG NGNVALDCAR 180
  181 VLSTASSGLL RISDIPGDRL NVLEGANVKD IKILGRRGPE HVSFTIKELR EQFKIKDWDS 240
  241 KLEISEIDAK NLTESLPKLE RKKKRLTEVL VKNIGIANGL RQCHFIFHRI PEKIIADSNG 300
  301 KVQEIIVKNN ETGQEETYPC GLLIYSIGYQ TLVLDGVPQN DKKMIDMKDH CRVNMVAACS 360
  361 SQVYATGWCA HGPHGIIVDT QQQSIFVADQ IAADFAQFKD STSNGVEELL EDRKVPFISW 420
  421 DEWKQIDRQE QDTGKLSGKI REKFTTFEKF LTKLKKCN

Type	Start	End	Confidence
Signal Peptide	1	43	0.63
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	458	0.99