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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE23992
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYPFDSFNV LVPWKIISYN CSENVEIFIL PIPHVNNLPV TVNLNYIAVL SSALTFCLPI  60
   61 SPPALSRSQP PLLQRQHPFV CVATALFFFL LLLFFCTASA FGRVRCLKAS RRRRSRRVCI 120
  121 EVEEDRVVYV FMFRSLFLFL LHPSHQKWLL AKDEDIERKM ERERERELSR SLIHFLFRIT 180
  181 SNLFVFILFG SCSSLLMERI VSRVRRLSPL HTFSDALLIS LLSESDFQPD SIQQGVVLFE 240
  241 KDEPTEYWYL LLSGEVQLYS KTYTGDFNHL KTLRCGALFG DLSTLTHSCS CLVTRPAQLI 300
  301 RIAQNHFLSV YNKHGDHLQP FIIIMHDILT DETPSDPIHP HSSGLFNGQR SMDLISTEIN 360
  361 PSEIVSVSTN GMLSKMILPS IPNQREKPMN RVVVNQQKNE ERNFIEFHNP TGIEKQIRDS 420
  421 GGILHRKMLT DNHQVIRDIT TEHTRVQNCM IGAEMIDWLL TLFVSTSTTC SSLSRIQMSA 480
  481 IWQVLLNNGL ISHIDGEHQF LDKTNSYYRW VQQFRSRNKV APSIEEVSKS ITLLSSVAPE 540
  541 TLFLMIVSKP GFERSPEELE VVYEELTFIK ALSHLSTMVK RQLSNFVKVE QYVHAGSVVF 600
  601 RQGEIGVYWY IVLKGAVEVN VNGKIVCLLR EGDDFGKLAL VNDLPRAATI VTYEDDSMFL 660
  661 VVDKHHFNQI LHQVEANTVR LKDYGEDVLV LEKVDIPRGA ALENSNSCNF NCGYSVMAGK 720
  721 AEKILEYVLE TRIDALGDDI SELDVFVEDF ILTHDAFMPD NTVCNFLKSY YFRTPYRATR 780
  781 DSITDSCTEE VRCKRRVVQF VYVWCSLLRV NFFLNPVTNS FVEELFCHVI DDRKRLGGME 840
  841 DILTRIGSIR STRENMQLVL ARHPAIVLDC GVLSAHTPCP VLPSDVCNQI IYLADTTCFV 900
  901 LPIRVDKTAE EICELSRRRM SFSAEPLNLV EVKSNGEKLI FSPNDRAIPT VLSLNSKLYV 960
  961 VNREEIPLLV PMEDQNGPTP SSHSSILHLI DSQELAHQLF LFHLQLLRST DSNELLYQVI1020
 1021 GRESFPLSMP FNLDLLVRRF NEVQHWSTTE ILLATEENRM EILKKFISIA TIAREYRDLL1080
 1081 TVFAITLGLS HTSISRLTLT WSKLPPASLK TFSELENLLD PTRNHRMYRL LVSKMSSPYI1140
 1141 PFVPLILKDL MFIHQGNKSF YNGLVNFEKM HMFAKIFRSF RQCKSQMDNG AEHEFIEPQS1200
 1201 LIRNLRVIDN QKKLMQLSYE IEPKSAPKRN VIFH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle