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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: unc-105
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHLAASRNS QINSSLRNIR MNGHLDWNQL RKSFEKQSTF HGISHAATAD GKWRWFWYTA  60
   61 FTICLLALLI QIFFLISKYR QYGKTVDLDL KFENAPFPSI TICNLNPYKK SAIQSNPNTK 120
  121 AMMEAYSRRI GSGDKTEGIA AALSATGGLH AKVRRAKRKA KGKPRLRDRR YHQAFAQCLC 180
  181 DIEQLTGDRK GSCFAAFKGK IEIDTNNTAG FMNLHTSRCL CQLDTVSKAL WPCFPYSSWK 240
  241 EKLCSECVDN TGHCPMRFYK GNELYENIKE QVDLCLCHKE YNHCVSTRDD GIILEISPND 300
  301 ELNDLDIGKK IASQLSAQQE KQAEVTTTEA PTVTQALGFE ELTDDIAITS QAQENLMFAV 360
  361 GEMSEKAKES MSYELDELVL KCSFNQKDCQ MDRDFTLHYD NTFGNCYTFN YNRTAEVASH 420
  421 RAGANYGLRV LLYANVSEYL PTTEAVGFRI TVHDKHIVPF PDAFGYSAPT GFMSSFGVRM 480
  481 KQFIRLEPPY GHCRHGGEDA ATFVYTGFQY SVEACHRSCA QKVIVEACGC ADPMYPVAEM 540
  541 FGNNTKPCQA VNMDQRECLR NTTLWLGELY SKGKEAIIPD CYCHQPCQET NYEVTYSSAR 600
  601 WPSGSAKVME CLPGDFLCLE KYRKNAAMVQ IFYEELNYET MQESPAYTLT SVLADLGGLT 660
  661 GLWIGASVVS LLEIVTLIVF ATQAYVRKRK GSISAQSHHS VPVHRASRVS LNTLHKSSTT 720
  721 QSVKLSVMDI RSIKSIHSNH SSKSKQSILI EDLPPAIQEQ SDDEEETTES SRTNGSCRYL 780
  781 APGEDLPCLC KYHPDGSIRI MKALCPVHGY MVRRNYDYSV SNSEEEDAED EVHREPEPFY 840
  841 SAPYEHRKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle