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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE21949
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.96
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGYKSLLVL VTVFVVAHAY QTGYYPLKRL VSDGPWQPVS LCPSEKVFGI QIKYNVNTSD  60
   61 VPTGIAIVCD RSRRASNSPG ERQWSSSQRC PNKLRVIGYS LQIEPNNTAG ANNIAVFCGD 120
  121 GSEPRSKRFN LTGNADRGLW TRAQFCEAGH VVCGIESQSD KPNNVNMVCC SPWKVSTRGT 180
  181 TNTNRNIKAH ETTRGFTQRP TAAGWTIRAN GITRGQTRVP GTTREPTHRP TTAGWTNGAN 240
  241 GTTRDTSRGF TQRPTTAGWR NGANGTTRDT SRGFTQRPTT AGWRNGANGT TIDTSREFTQ 300
  301 RPTTAGWTNG ANGTTIDTSR GFTQRPTTAG WTNGANGTTI DTSRGPTHRP TTAGWTNGAN 360
  361 GTTIDTSREF TQRPTTAGWT NGANGTTIDT SRGPTHRPTT AGWRNGANGT TRDTSRGFTQ 420
  421 RPTTAGWRNG ANGTTIDTSR EFTQRPTTAG WTNGANGTTI DTSRGFTQRP TTAGWTNGAN 480
  481 GTTSGTSRGF TQRPTIAGWT NGANGTTIDT SRGFTQRPTT AGWTNGANGT TSGTSRGFTQ 540
  541 RPTIAGWTNG ANGITRGQTR VPGTTRGPTH RPTTAGWTNG ANGTTRDTSR GFTQRPTTAG 600
  601 WTNGANGTTS GTSRGFTQRP TIAGWTNGAN GTTIDTSRGF TQRPTTAGWT NGANGTTSGT 660
  661 SRGFTQRPTI AGWTNGANGT TSGTSRGFTQ RPTTAGWTNG ANGTTSGTSR GFTQRPTTAG 720
  721 WTNGANGTTS GTSRGFTQRP TIAGWTNGAN GITRGQTRVP GTTRGPTHRP TTAGWTNGAN 780
  781 GTTRDTSRGF TQRPTTAGWT NGANGTTSGT SRGFTQRPTI AGWTNGANGT TSGTSRGFTQ 840
  841 RPTAAGWTIR ANGITRGQTR VPGTTRGPTH RPTTAGWTNG ANGTTRDTSR GFTRRPTTAG 900
  901 WTNGANGTTS GTSRGFTQRP TAAGWTNGAN GTTSGTSRGF AQRPTAAGWT NGANGTTSGT 960
  961 SRGFAHDQPQ LDGRTEPMVL LVVLLEDSPS DQPQLDGRTE PMVLLVVLLE DSPSDQPQLD1020
 1021 GQLEPMALLV DKRESLELLE DPPIDQPQLD GQTEPMVLLV ILLEDSPRDQ PQLDGQVSLK1080
 1081 KYVVVIIGVV LLIILMVLAY LFISGHKGFD EQRFFNVQRV QNIRSIQNIQ SIEEVNAAVE1140
 1141 MLCHH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle