YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	asp-1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTFVLLALV AACSAAVIQV PTHKTESLRA KLIKEGKYTA FLASQHAARA QQLNTGFQPF  60
   61 VDYFDDFYLG NITLGTPPQP ATVVLDTGSS NLWVIDAACK TQACNGYPDS GYTKQKFDTT 120
  121 KSTTFVKETR KFSIQYGSGS CNGYLGKDVL NFGGLTVQSQ EFGVSTHLAD VFGYQPVDGI 180
  181 LGLGWPALAV DQVVPPMQNL IAQKQLDAPL FTVWLDRNLQ IAQGTPGGLI TYGAIDTVNC 240
  241 AKQVTYVPLS AKTYWQFPLD AFAVGTYSET KKDQVISDTG TSWLGAPNTI VSAIVKQTKA 300
  301 VFDWSTELYT VDCSTMKTQP DLIFTIGGAQ FPVKSVEYVL DLQLGGGKCA LAVFSMGSGG 360
  361 FGPSWILGDT FIRQYCNVYD IGNGQIGFAT AVHKGL

Type	Start	End	Confidence
Signal Peptide	1	15	0.99
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	396	0.99