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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: npa-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTRSLLFL FLIASVALAG NHNRHHRNRR DNDLHDWLTA EQKESLKDIA QGTEEFKKKV  60
   61 AVFYNELPAE KRAEWDKFYK THCFEWTAKA QGADEETEFQ KNLADNDVEK VRQRIGELKK 120
  121 DLDEKARKNV EMWEDDCYKL VKPMRKRREI EAEFQDFVKW MTPEQLGDIN ALKTAGKDSE 180
  181 IQDKVKEYFA KLPADQQKTL TEEFKGKCKV YFTPLMTSDE LEKIKTLKGD KEAAGALVKG 240
  241 VVDRQDGEVK VIAEKMLSVC GEVYKESTRK RREIEAAFQD FVKWMTPEQL GDITALKAAG 300
  301 KDSEVQAKVK EFFGQLPADQ QKTLTEEFKG KCKVYFTPLM TSEELEKIKT LKGDKEAAGA 360
  361 LVKGVVDRQE GEVKAVAEKM LTVCGEVYKD SSRRRREIEA EFQDFVKWMT PEQLGDINAL 420
  421 KTAGKDSEIQ DKVKEYFALL PSDQQKTLTE EFKGKCKVYF TPLMTSEELD KIKTMKDDKV 480
  481 AAGALVKGVV DRQEGEVKAI AEKMLSVCGE VYKDSKRKRR EIEAAFKDFV HWMTPEQLGD 540
  541 ITALKAAGKD SEVQAKVKEF FGQLPADQQK TLTEEFKGKC KVYFTPLMTS DELAKIETLK 600
  601 GDKEAAGALV KGVVDRQEGD VKAIAEKMLT VCGEVYKDSS RRRREIEPAF QDFVKWMTPE 660
  661 QLGHITALKT AGKESEVQDK VKEYFGQLPA DQQATLKEEF KGKCRVFFTP LMTSEELDKV 720
  721 KTLKANKEAA GALMKTVVDR QSGEVKATAE KMLGVCGEVY KESSRKRREI EAAFKDFVQW 780
  781 MTPEQLGEIT SMKAAGKEGP ELQAKTKEFF EQLPADQQKT LKEEFKGKCK VYFTPLMTSE 840
  841 ELEKIKTLKG DKEAAGALVK GVVDRQMGDV KSISEKMLAL CGEVYKDSSR RRREIEAVFQ 900
  901 DFVKWMTPEQ LGDITALKAA GKDTEVQEKV KEYFGKLPAD QQKTLTEEFK GTCKTYFSPL 960
  961 LTSEESEKIK EHVASGDKEA SKALVKGAVD RQEGEIKTIA EKMFGICGEV YKESKSRRDV1020
 1021 AAKIEKHLSW LQAEEKEEIL KMSKEGKSKD DIKKRLFEMV EAKEKDAGEK EKTVKLCYAW1080
 1081 MDDVATKEEI EGLHKLHHVD HGACKKKVRE FIGRLPEEKQ KAVEASLPFC EKLWYGDHAS1140
 1141 HEGHEGHGDH SGHNHHHIKR RHLAVIEKYI EWLDEIQKGA IRELEASGAD FNVIADKIKE1200
 1201 FFHLLPEQKQ TDVKEKFQNQ CMTWAKEVSK PTEWEEIKKL HAAEDFNTLK LKLVELEERL1260
 1261 TENQKHTIEH VRGVCYRLWG IKNLARRRRV PNSEASFQEK AAKYLDWMNE EQLNELKRLK1320
 1321 SEGKKSEVMK AILKFYDETT GDAKEKAEGK LKEACKEYSV KAFGEEKVAQ FKAQYKKLKD1380
 1381 ENAEQSEIEK LSNQYIDEIE DEQKKDFAKA VVTGCKHVYA STRSRRDLIA QAVAEYLQNA1440
 1441 

YRC Informatics Platform - Version 3.0
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