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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dpf-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEADLLEG YDEELGGNES QKRDCKGITT AIVVVLLILV MIFAALVFFT PLFAAKSFGS  60
   61 WRLNVSDLRS LRYPYAEFAF TDNNAVVMQS WEGVEIVEDG VSRLIFGREN GAEITPSADR 120
  121 KYFAMMDHAP NPGMNPQNET FHLKIVNNNE RLNPLLPFEV EELFRELSDS RITYDIGLRK 180
  181 EESVIQAFKW NGKFNDFVFV ESNKIYYQSS PEEEGLTRVS NGGEHTVDGL FDWIYEEEIF 240
  241 GRKDAMWWST KGDQLAYASY DNHLTKNVSL KTYHRLEPYP IDTNFHYPKT FAKVLPTYTL 300
  301 SIWNKKTEQS RQLDVQLKDS LSYHYLLAVK WLEINGTEQL VSVWTNRYQN EVALTICDWD 360
  361 TAICRLEFEY KYASKRWVTH DDFHSITSFE DTLFFLLPHD KRDNAFQQVA SLRLSHGQLR 420
  421 TPKFLNLGEY DVTSINGINK ETRTIFFHAA APKPSHRSLF SYSLADESRN SAYCISCSIK 480
  481 NCTWAQAQMD DQMKTAIVSC KGPAAPHTAI VNLTRMDSDK KTEHANLLYD KTYQNRVEEA 540
  541 GLPVIIKETI KISDDFDALI KLSIPKDIYN RDKHQAIPLI VHVYGGPNDQ NTKEATQIGI 600
  601 EEVVASASQA AILRIDGRGS GGRGWKYRSA IYGQLGTVEV EDQIKAIKVV LRLYRHLLDA 660
  661 RRVAVFGWSY GGFMTLSMVN EAPEQFFKCA VSVAPVTNFA YYDATYTERY MGDAPLESYS 720
  721 DVTKKLDNFK STRLLLMHGL LDDNVHFQNS AILIDELQNR GVDFDLMVYP NQAHSLSSRT 780
  781 SHVVGKMTHF LRQCFYTDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle