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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: dpf-1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAEADLLEG YDEELGGNES QKRDCKGITT AIVVVLLILV MIFAALVFFT PLFAAKSFGS  60
   61 WRLNVSDLRS LRYPYAEFAF TDNNAVVMQS WEGVEIVEDG VSRLIFGREN GAEITPSADR 120
  121 KYFAMMDHAP NPGMNPQNET FHLKIVNNNE RITYDIGLRK EESVIQAFKW NGKFNDFVFV 180
  181 ESNKIYYQSS PEEEGLTRVS NGGEHTVDGL FDWIYEEEIF GRKDAMWWST KGDQLAYASY 240
  241 DNHLTKNVSL KTYHRLEPYP IDTNFHYPKT FAKVLPTYTL SIWNKKTEQS RQLDVQLKDS 300
  301 LSYHYLLAVK WLEINGTEQL VSVWTNRYQN EVALTICDWD TAICRLEFEY KYASKRWVTH 360
  361 DDFHSITSFE DTLFFLLPHD KRDNAFQQVA SLRLSHGQLR TPKFLNLGEY DVTSINGINK 420
  421 ETRTIFFHAA APKPSHRSLF SYSLADESRN SAYCISCSIK NCTWAQAQMD DQMKTAIVSC 480
  481 KGPAAPHTAI VNLTRMDSDK KTEHANLLYD KTYQNRVEEA GLPVIIKETI KISDDFDALI 540
  541 KLSIPKDIYN RDKHQAIPLI VHVYGGPNDQ NTKEATQIGI EEVVASASQA AILRIDGRGS 600
  601 GGRGWKYRSA IYGQLGTVEV EDQIKAIKVV LRLYRHLLDA RRVAVFGWSY GGFMTLSMVN 660
  661 EAPEQFFKCA VSVAPVTNFA YYDATYTERY MGDAPLESYS DVTKKLDNFK STRLLLMHGL 720
  721 LDDNVHFQNS AILIDELQNR GVDFDLMVYP NQAHSLSSRT SHVVGKMTHF LRQCFYTDK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle