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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE20579
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.90
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTKKAFLLL TFNVLIYLAA CQETERILAN NGTEDNEITT SKGVSPNTNP LFLSNSTAGL  60
   61 YDSKGRIRLT IGHIGAIGAL RNDVKILEVS HKALQAEGIL DDDLDVEIIS QTGCGESYEG 120
  121 VAVAADMYHL QKVKAFIGPY CNAEMDAVAR MAAFWNIPII GYMAASNNLA DKNAYPTLAR 180
  181 ISAFIISKIH KYYFFFNFLD DRSKVGISLR TTNSIAEATC AMLRHYGWNK VAIITNTGIL 240
  241 AYDRVLSFEE VFHQRGINVV KKIMFDEFAD SKAMIASGLL NDIKNSARIV VCLFSNTRES 300
  301 SREFLTAANT QGMNVNEYGY VFPWLQDGGK DASPWTGADG SMLQKVKDQY ANAIIIDDVN 360
  361 SFDNTIVGPF IERIKDVGLT EADVDIANIY GYLYLFDALK LYAIAARKVL NETGKAENLL 420
  421 NGRMMWQNMR KLKFVGMVGA SGIASGQVSM DDRAERAPLY RGFFVSPNSD SVLPMVHMEP 480
  481 TMLDNCDGIA NKSGCYEIVV TDIMRDFWPS VDRKMPKDEP DCGYRNERCD YTLIIIGAAL 540
  541 ILLFIVAAVS AFFAQKILEK RALDKLPFRI YRDDLQFIDE EQLKSMLSLG STRTKMSNMN 600
  601 YGSRNHAIVG TNTHAIYHKY VQRRPIVFNR ADKTLIQLAK NFSQNPKEAG LPNYFKHLFY 660
  661 DRNHIQMKAA VHDNINPFLG MVWNEREEML LVWKFCSRGT LQDIIYNESI QLDTKFHGAF 720
  721 IRDILAGLEY LHASQIGYHG SLTPWSCLID RNWMIKLTDY GIADPLERWE KSQSISRDGL 780
  781 TSDDDKSQAT QATSILYESP EMLKNREKNR VRRVDQDWMR QTQTRRQLGD VYAFGLVMYE 840
  841 IIFRALPFPE GTNQSELVEW LRDGSKVVKP TIPQNKVLNM DLSALIQDCW NTTPEMRPSL 900
  901 RRIKLNVETY LNIKGSLVDQ MTRMMEQYAN NLEKLVAERT GMLEEANQRA DRLLSQLLPA 960
  961 YVANELKLGR PVPPKTFTSS TVLFSDIVGF TEMCQNASPL EVVAVLNGIF DGFDQFIARK1020
 1021 DAYKVETIGD AYMVVSGVPE ENGHRHINEI ASIALDVHKF LSEFIVPHKR DTKVQCRLGF1080
 1081 HTGPVAAAVV GLNAPRYCLF GDTVNMASRM ESNSEPGKTQ ISETAKNLLL KEYPDYICEQ1140
 1141 RGEIPIKGKG LCMTYWLMGT KSEGSGRSGA YLAPSMKSAG TGFTGMLGNS ANDYSLNLKN1200
 1201 PTGLQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle