YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7509175
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNYTEIFKI KIPRKKLNIT CYINSWLAIR LEYFEIGRTF LIFLESSLPG CLTLSKLFVS  60
   61 LYFHLQNVTG LFLVIYRFTS VYSINSEKVW NRWYFLVPVL GLLYSFIIIS PWWLFQNYVT 120
  121 RVRIIDGKLI KIVNQRALLT QASINPYFSA FYFLLIILIG VWTTVLLENR WKKSHSRRHN 180
  181 HFIKKLTRVI FCNSFLMSGN LLLLVFNRFQ LEKPVHMRHF SVVFTYFFFL LFFMIIFLSS 240
  241 GHSMWPLFLL GIIGVVSAGI PGTNGDIRQP NFQKELMDEA KVYLFKFGYM IPEPHQNVKT 300
  301 IQEPSEKQTK DALIRFQSAF LYYSSGDVDV PTQAKMNEWR CANNDMDKGQ PIPPASKKEL 360
  361 WTKKSLTYKV VNTPNTLSQA QIRSAAHEAF EQWTRASGFK FVETTGATPD ITITFYDVPQ 420
  421 SNLRIAGSAS KPVNSHIILD KNQEWAYKSQ APMGISLYHT LLHEIGHILG LPHTFYRGSI 480
  481 MHPIFKPVLL PHGTVDTVPN VDRLAIRKIY GLSSVDHSTP SSDVDRSKCP KHLDSVVAIN 540
  541 DQEWLFFRSN KVYKLNNRKF VDSGRPIQQV FPRGPQFVNA TVSSGPLTLL FVERTIYGYE 600
  601 YDGVQFTEAP NYPKELHDRV LFYPQGAFPL NNGSVILLSG NVFATYNVQQ NAPSFLNDKN 660
  661 RYFPNLPEDI KSGIEKTQGF TDAYYMFDEA TVSDYDMNSK QVLQLQNIPD FLKCT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle