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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: frm-4
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNNTSSSF LGRLTTSTRS SFMSPKDVRC NVHLLHDSDI IGNEFPRTQS AQTILDYVCQ  60
   61 LKHIQEKDFL GLRYQDHHKH RYWLDLTRSI NHVVKNFKTE SMTLHLRFRY YPSDPARLRD 120
  121 PNLRYQLFVQ LQRDLLHGRL YCPTSSAAEL AALILQAQLG DYNEEKHVGN YVSGYKLLLK 180
  181 QTPKLEERIA NNHKELKGKS SESAELEFLE KASQLDTYAF DPYTIKEPHD TLPVYIGASC 240
  241 KGILIYTGQS RTHNIDWSEL VKVDYSGKEI RLTLSENYRG QITAAGTPTG TLNGHGPGSP 300
  301 SIMDKSLTKK PLTLKYTCPS GQFAKHLWIH ILSQQAFFNE TSAQDVKLKF SKPRIPLLSR 360
  361 GSTFRFPSKR VYREIEEEDS KSILFDKSIM ETSAVMNETT TSNENEESIL NCSTISAPLS 420
  421 SGSGVVRYDL LRQTPRVEQP WLKQNSLKVT TVHDNTASSS SSPDNSETQN NNLSKITNLN 480
  481 LSIEREVSTS PSTSPVPIVH TQQHSDHNSQ NLEKNGNGKL ANGGGSGVDL GKKTVHTNGT 540
  541 TLICTEEKQD SILSMDESLT SKSLISRIAN TCFVFFLILL LIVAIVIVLF EKSEDSAHND 600
  601 FIESHRALSD LRHLYYEPTR HYVVEQYRKH FGAKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle