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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ptr-19
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFDCIEKRF AHAFGAYSGV VVRHPFPFFI IPILITAGLS TGLLRHEQAF MKDELELYTP  60
   61 TDAQARKELS QLDHLFHIND SDPFYATRRY DIRRAGYIIV TNQEEDGDIL NPLVMHSAMQ 120
  121 LWSIVQSLTV EDEDDRRINY PSICVKFPIP PEFSKALHSL FAPNMTTPEE ICVSNPLVEI 180
  181 FKLLLVSDRS FLNRSIDEMT LSQISDAIQF DSGGMTHLLG GVTLDDDKRI AGAKAMLLPY 240
  241 ALRHSSDDED WVAEKWEVRL ADFLLQYDSP IIRASWWTYE TLAAESARDR LQLIHMLLPC 300
  301 FVCVSIFTIA CCCVFSWRRS RPWLAIGGVI SAAMAIASAV GILLLAGYGM TSVAYSMPFI 360
  361 VFSVGVDNVF ILLSAWRSTS STETLEHRMK ETFADAAVSI TVTSLTDLIS FGVGCATPFP 420
  421 SVQMFCAYAV AAVIFTYIYQ LTFFAAVMVY TNRREINNRH CIFFHKLKKD TLPEKIAAQG 480
  481 DRSFEKNTIL AQFFRTTYSD FLLNPLVRIV ILVTFCVYLG VASYGCTKVK LGLEPNDLLP 540
  541 ENSYGKRTLM MAEKYFSDYG SSLHVWMYNL SEVDVAPRKI WNVLEKEVEL YEHTEFTASS 600
  601 DSWLRTFLAF VKQAGLLITP ENFVYILKNV FLSQPQFAKY NRDVVLTEDG EHLEASRIPV 660
  661 QLRHVGSANQ SRAMRLFRRL AETSELQTGV YADFFQFAEQ YNAVLPGTLS SIAYAGVAVV 720
  721 AVSLILIPEP VASLWVSFSI VSINIGILGF MTFWSVRLDF ISMVTIVMSI GFCVDFAAHL 780
  781 AYNFAKGQNM DGSERMRNAL YAVGAPILMS ATSTIIGVSF MASAESYVFR SFLKTIMLVI 840
  841 LLGALHGLVI LPVLLSMFYC GGSSKKAKEH IDAVDQKLQA QYNNPARTAS IQFLSNPDLY 900
  901 TMPPPPSVEY SLSTLEFNRT QSRPLGAPPA LTGSPKRELS GLSGPPEYEE HDPTGLSTFG 960
  961 VSPAVVANTT GMIPMRAKLK YPSSMTQRRD SESRSTPELY YPS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle