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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE19142
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFGEQLASH LTPEWRKQYI DYERLKNLLY DDMMEVPADD DRREEHISRL DEKFFNECDQ  60
   61 ELTKINLFFS QKIAEGQGKH HELQTELQVF KDVLGSRSDT TGIRRRFGGK DKFHKETTRN 120
  121 EQQLKLAFSE FYLSLVLVQN FQQLNATGFR KILKKHDKLT GNERGLDWRI NKVEKSSFFL 180
  181 NREIETLITN VETSVINDLE AGNRQAGMKR LKVPPLSEKQ KPLTTFSLGL FIGASIILLL 240
  241 AILLTWIASP ARPQEPKWVA VRLFRGPLLL FLSIFLCGVN MAGWAAAGVN HVLIFEVDPR 300
  301 NHLSYQTLMQ IASFMIMLWS FAVLAYLYAH MLHIPPFAPP LALMVVCLIL LLNPIAKPDS 360
  361 VFHRNSRFWL LKHCYKCFTS PFHFVTFTDF WLGDQMNSLT TAFLDFQYFV CFYATEVDYS 420
  421 NGWIEVKGIN STTGSVPWGS VELSNGKDQC ASAAGLRSLM SIIPAMIRFL QCLRRYRDTK 480
  481 RVHPHLVNAG KYSTTFFVVA CGALNKYYEA TDPNTTSIFF YIWILSYIMS FTYTFLWDIF 540
  541 MDWGLIDPRA PKEARFLREE MIYGSKWYYY MAIAQDFVLR LAWVLNVSLG EAWTLDSDFL 600
  601 TTVTAPFEVF RRFIWNYFRL ENEHVNNCGQ FRAVRDISVK PIRKGDLESL LSKMDQMDGV 660
  661 THRGQDLMER VKKQKKSAKA SRQLLRKNRF NRMIAAAPVV TTTFIDTTNT 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle