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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: eat-20
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTFCRVLLI FGIYVAVCCA QSVEDDVFHF TNPSQGNAVW ILDESSLPWT GGYQFLRSIS  60
   61 GMPTTLLSVV DSSTGVTLGQ CVAPQDATGN FSKRWERFSW ELTASGLDCT FEHGAAIRVE 120
  121 FDRTQNPRTF SIRIQSITGP ACLRDVVVQT EQATGCPPHL SRNSFTANAL NCSCPFLDAA 180
  181 NEDSEIENED VDMLANTPQF PLFKGIDPSV LGSANPPTLP PSPCANHECH NNGTCLVSQE 240
  241 GAATCLCRNG FTGDRCELDV CSSVPCQNGG VCRSNNGIAY CECPPAFTGL LCESAHTDES 300
  301 VAPICRPECS NGQCVFKDGQ AQCECRQGFT GANCNVLDVC LGDAACSMFG PLAKCVLDDN 360
  361 MDKMSSLTLI NGTYDCLCPH PIHGQFVDCM QLHAPSATSV QPTEQVVINN VTPSFPVLEI 420
  421 SKLPTGAPVT FTATSTTLMV TQPTVTVSPT HQVPSEPFVG FTVTRAPLRP LDIGSTTLPP 480
  481 PFNQHIITAG EPTWSSQQPH QPSEVPTQTT FIFPQTPETT TFAPTTGTQQ PVHKFVSPSV 540
  541 PDENEEEEEE ETTEETEETF PTPSTMQVAT NGQFTTETAF VTSTIPSTTT DMEETDEDED 600
  601 MTEEVTDSST QPSTTVFVQP TTTFTTEAPT TTMEEEEEMT TDQVEDIESE EIATTTTQTS 660
  661 LPFWMTTTNK QVVPDSPTPM VIMPHPQPDE KMETSTEGVV DEESDEERTT ESNEEVVTKN 720
  721 AEATTPSDIT HHHTSSGKQS SAAASWIIAI IALIVLGLLL LATSLFILRY IRQSRKLHGK 780
  781 YNPAREEHNL SAAYAMPMSH IAKEERLI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle