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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE18259
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPENGAATW HPAKRSCLGR LTTLETLLLV FLGLLITALL SVLFLWLWVL DGYKTFTDGR  60
   61 PIYPLPFENS SVAVDRSAKN HNDVVCTSRE CVRLAGFLAE NLNSKINPCE DFYEFACGNY 120
  121 GLNKNLPANK PLRHTISDVQ SRLNKQVKSM LQSPISANEK PWDKVAKGYY QKCLDEEELE 180
  181 STGVEAMRDI AKRIGGWPTL EGDKWQEWSH SWEEQIALVL NLTGVNAVIL EMAVTHDPSN 240
  241 SSRSVIELDQ PKWGAGSRYP YLSGANDPML RNYTTLMKMT AVALGADPAI AEKEMNEAME 300
  301 FELKLVNFSA DDMVRRDPER GNNRFELWQL KSVFPFINFE KYLKTVFKEL VALSPNHTVI 360
  361 VREIDYFVGI QHVLQSTPKR VLANYISWRL VQGFSPFLPP SAREPFYQFK ANQTGMFNSP 420
  421 PPDRWEDCVT LSVIMMDMPV GRLFVENFFE KERAMKKMTE LTSYLKNEFI KQLHVLDWMD 480
  481 EITRRRAISK ANMIEYKSGF PMVLFNDTWM EKNWGMIIKP REYLLHLTIR VKLVRFTEEL 540
  541 LRLDQPLDRS MWFQSPAQVD AYYAPNNNEM IFPAGIMQFP FLTLGVPNYI TYGMVGAVIG 600
  601 HEVSHAFDDQ GGQYDEMGNL NDWWDAETEE KFIEKTRCFV RQYENVHVVE ADIHLNGQLS 660
  661 LGENIADNGG VKTAFNAYKA WKSNTTGISE PALPGFQNFT SQQMFFLAYA NNWCSLVRPK 720
  721 HYIQIILTDV HAPSKYRAMI PLQNRPEFAK AFQCPIGSPM NPERKCQVW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle