YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	folt-2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	46	0.64
Transmembrane Helix	47	68	0.72
Cytoplasmic	69	71	0.62
Transmembrane Helix	72	94	0.78
Non-Cytoplasmic	95	100	0.76
Transmembrane Helix	101	119	0.86
Cytoplasmic	120	130	0.86
Transmembrane Helix	131	153	0.84
Non-Cytoplasmic	154	161	0.71
Transmembrane Helix	162	183	0.92
Cytoplasmic	184	233	0.98
Transmembrane Helix	234	253	0.75
Non-Cytoplasmic	254	272	0.70
Transmembrane Helix	273	289	0.39
Cytoplasmic	290	298	0.49
Transmembrane Helix	299	319	0.79
Non-Cytoplasmic	320	323	0.44
Transmembrane Helix	324	350	0.57
Cytoplasmic	351	356	0.55
Transmembrane Helix	357	381	0.87
Non-Cytoplasmic	382	391	0.61
Transmembrane Helix	392	414	0.89
Cytoplasmic	415	424	0.58

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQWKVMVLI CMYGAVKEFR PTEPYMYEYQ HTVLNMSEQT LNSQVYPIWT YSYLITLIPA  60
   61 FLLTDVFLYK PLLVFEAFSY FLCWVIFVFG KSVWSQQVLE VFYGWATATE IAYFAYIYVK 120
  121 VPKTEYKSAT AFTRAALLVG RFLAYALAQL LIGLNWTSYS TLNIISLVAM TIAVFLALIL 180
  181 PGVEWKEAYE KKLEDNNVQG NLKEIVDQSS YMDYLRMFFV GLRHNLMAIY RNPLILKWSV 240
  241 WSALSSCIFY QVTNYTQTLW GTLPESANRY NGITEALVPL LGIPADLITR QLNVNWNRWG 300
  301 DLLLAVGSIG QAGLLFWMSQ SHHIVVLYLS YIFYRVIYQL TTTIAQSTLA FSLDSRLFGL 360
  361 LFGINTFVAL LLQSILTAVV IDWQKLDIRP QFVVYSCYHL VVAFGFAIIF GIWASRRFFK 420
  421 TSTN