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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE17689
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLYDKVKSI LTIPDKNSND SIVNATDLYL EWEKGDGQYL LPLLLIFVIF FCITCGVFQA  60
   61 LLSLVVLCIR SLCGFDEEDE NFNINGNHFA RNSTPSEHHE EIGNLCHDNQ QNCKSIREQF 120
  121 TKIGLENITK MIRYIILLVY FLIFEVNSQL DCSKAPTPAI RIMCNQIQRW DQKARATPSL 180
  181 SGDVKTPGIA GKAMAAEFSP IASNVFQCMD IACLCVFFRG TGGNNCVVQG RPLGKVVRKE 240
  241 YRMLSDDERQ RLHQAFRTLK QNGEYDRLAR VHAQYSESGA AHSGPAFLPW HREFVDPSLH 300
  301 LPYWDSSLDQ NLPDSKDSIL WTNEFMGDAN GEVNNGPFRS WKTVENKPAI TRAVGAQGKG 360
  361 YSEDEINTML GQTDIAQVLA FSAPQRGCPY QPNFNVPEYT HGNPHIYVGG DMLETSTAAN 420
  421 DPIFWMHHSF VDLLWEMYRQ SKQTRATRET AYPADNRQCS SEHHFRAAFM RPFTPMRNAD 480
  481 GLSNMYTDNL YSYAPRPSCN AGPTCGSPYL FCDKSHGAPR CAVRMKPEGN CASFKNGEDA 540
  541 CYQGSCQSGK CVAGSQNVTP PPTIQPTKPV VTVEVFSETC LKIRLKFFQT SCFNENECCG 600
  601 PWSAKGECQK NPVYMNVWCK ASCRQCTPNY NINEECSDRH TNCAMWSRSG ECNKNPLWMS 660
  661 ENCRSSCQKC GRSRAATCGG GGGADSISNP TTMPPATNNG QQNTPCDSPM CYNEDQCCPI 720
  721 WAQRGQCRSN PGYMTCQCKV SCGVCRPNYV YGPCADYHYD CAAWARRGEC LKNKWMPENC 780
  781 RRSCNTCVNQ QQLAARCATR IVRSAFLELI RMK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle