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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kpc-1
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNISWYRHC SVRLQLVTLA LFLLLGSASL GSAHIDEEFE DDVTTTISSI ASPMRRTYTN  60
   61 EWAVRIAGGK VEEANRLANK YGYTNLGPII PGDEYYLFRD DRKKSRSSRK TRSLSANQLQ 120
  121 HEEDVMWMEQ QVAKRRVKRG YRRIRRHTDD NDIFEEDDDG TQISKSRNRK HPDPNDPLWT 180
  181 DMWYLNRGEH HSDSTTRMDH NVKEAWDLGY TGKGVVVTIL DDGLERTHPD ISPNYDERAS 240
  241 YDVNDRDNDP MPRYEFSDEN RHGTRCAGEV AAIFNNSLCI VGIAYNANIG GIRMLDGDVT 300
  301 DAVEAASVGH NADYIDIYSA SWGPDDDGRT VDGPAKLTRS AFEKGITMGR KGKGSIFVWA 360
  361 SGNGGKDADS CNCDGYTNSI YTLSISSATE NGNIPWYSEA CSSTLATTYS SGATGEKMIL 420
  421 TTDLHHACTN MHTGTSASAP LAAGIVALAL EANPNLTWRD LQHIVIRTAK PINLRAGDWT 480
  481 TNGVGRNVSH SFGYGLMDAG AMVKLAKIWK KVDEQHRCRQ FYPSRYKNIP NGNRLQLQLY 540
  541 SDGCYGGADE NKVSYVEHVQ AIVTLKAPKR GDLQIYLTSP SGTKSTLLTK RARDTSRSGF 600
  601 TDWAFMTTHN WGEQAAGLWI LEIDNDGWDD AELVKWELVL YGTDRETGDF GGQHASPLAV 660
  661 RSVQMEATSS GTQYSIFHVI TLVILTFSQI LY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle