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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE16894
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRAGAVLLR GATRTRLLAA ASAHQSFATF SQRNQSILMM KSMELAGNSG ERRFYSTHDD  60
   61 PIAVDDSLEL YKDLGGMSPI QVPADMPNVP MLAINRYPLF PGFIKKVDIV KDDNLKALIR 120
  121 RQLSLKQPYA GVFVKRDDEN KEETITSLSE VYPTGSFVQI IEVRDQGSVL ELVLSAHRRI 180
  181 RALEPIDEIT PKNETPLNGR RARGKRAASA TSPLTPPPSP PPLAPSVASV APEISATEEK 240
  241 EEKTTPPSAT GEKQKKGIIM VRTENVVAEP VPKNNETKAT MMAIVQTIRD VVQFNQLFGQ 300
  301 QINLLLHPSQ NVIDNPVYLC DLVATLVQSA ETKDLQEMMD EIDVSKRLKI ALLLIQKEKA 360
  361 VAKLKYDINK DVEKKVQDHH RKYLLNEQLK VIKKELGIEK DEKTTIIEKI DERIKTLAVP 420
  421 EYALKVINEE KTKLQFLDPH SSEFSVTRNY LEWLTSVPWG LTSPENRRLS VAKKALDEGH 480
  481 YGMKDVKERI MEFIAVNLLR KSIGGKILCF HGPPGVGKTS IAKSIATALN REYFRFSVGG 540
  541 MTDVAEIKGH RRTYVGAMPG KMIQCMKKVK TENPLVLIDE VDKIGGAGFH GDPASALLEL 600
  601 LDPEQNANFN DHFLDVPVDL SRVLFICTAN EISKIPGPLR DRMEMIDVSG YLAEEKVEIA 660
  661 HQHLIPQLRK DTSLATEQLK IEDSALEELI KHYCRESGVR NLQQHIERIF RKAALQIAEQ 720
  721 QNEDEEPAEK ATTAITENSE AEPITSTSSA DCLKSSAEQI VVCTENLQKF VGRPKFTSDR 780
  781 MYEVTPPGVI MGLAWTAMGG SALYIETVLK RPVDLTNDKD GSIETTGNLG DVMKESVRTA 840
  841 LTVAKGILAR EQPDNKFFDK AHIHIHVPEG ATPKDGPSAG VTLVSSLLSL ALDRPVVQDM 900
  901 AMTGEISLTG KVLPVGGIRE KVIAARRVGA KRVFLPNENR RDFDDLPEFM KSELDIRFVS 960
  961 HYDELYEHLF Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle