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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: rib-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKLNGSSR SFVPSLRVSA FLIFIFFVIT YIIIYNVSFS EPSWITQDAL KQNIENLDDY  60
   61 DASCSGYSIG RILREQKRIL ASVRLELTES QVKIEEIRTV QEELQRLIPQ KQLELSALEG 120
  121 EIEAAQRQLE ELRETQNVKV FLPFSPLQIP RELEQPSQIS PNQLDDIIDY SRCSISSFMP 180
  181 VYVDIITSGQ SEKEWLNVFQ EVIPNLVETP DKACIKIHIS NGIASPNTTF NSILFNVGSP 240
  241 IINFQSKSIH VQASKIRSFD FPVDVNHIAV EKVDLTPLLP FQRENLISLI VDNTELNFSA 300
  301 FSSLSAEPSR RPIVIVKCSQ ENCSLERRRQ LIGSSTFCFL LPSEMFFQDF LSSLQLGCIP 360
  361 IILSNSQLLP FQDLIDWRRA TYRLPLARLP EAHFIVQSFE ISDIIEMRRV GRLFYETYLA 420
  421 DRHLLARSLL AALRYKLQIP TREVRRNQAI PLFNSSFTAP KGSVVNVQAN FDDEYLLGPL 480
  481 ESRVESTSYA YNFTEFQLYS YDFWNIIMSP HYTKEFLVNA AELPTEAEFF EDTKIGFRPI 540
  541 EPGSGAEFSK ALGGNRQREQ FTVVLLTYER DAVLTGALER LHQLPYLNKI IVVWNNVNRD 600
  601 PPDTWPSLHI PVEFIRVAEN NLNNRFVPWD RIETEAVLSL DDDIDLMQQE IILAFRVWRE 660
  661 NRDRIVGFPA RHHARYGDSM FYNSNHTCQM SMILTGAAFI HKNYLTAYTY EMPAEIREHV 720
  721 NSIKNCEDIA MNYLVSHLTR KPPIKTTSRW TLKCPTCTES LYKEGTHFEK RHECMRLFTK 780
  781 IYGYNPLKFS QFRADSILFK TRLPQNHQKC FKYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle