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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: haf-8
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.52
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRISCSKSVP FSDLININTG AAGEIVDKND DEEENRLPLS EHLWEIVKLC GKQWRWFVPA  60
   61 YTLLILDCAL NLIEPALYGQ MMTNAIQMKS FDIIKRACLL LALIQFSEAT CKSACYFFMQ 120
  121 YAEKLTARNI RIQLFRSILH QEISFFDENK TGQLVSRITH DSESISNTLP VHIETLVNNL 180
  181 FMFFGSIPIM FCYSWQLTLT SFIEFPITLL MTRYYGLAVE KLSEKENDAT AASNETVEEV 240
  241 LSAIRTVRSF AAENFEQKRY TKNTEDWFKI STKTVTLGTI YNYFWALMLR SQDVIRYLYG 300
  301 GYLALNGRMA PEALLTFIFY HWRLHTAINA FSSLFSGVMK TIGLSRKVIH LINRKPQLDY 360
  361 DFGTETPEIQ GKIEFEVVEF AYPTRKTVNV INGINLSIES GKTVALVGPS GNGKSTLVSL 420
  421 IQQFYTPQSG RILTDGIPIQ NINHQHYHSN IALVAQEPTL FSGTIRENIL FGIENGTEEA 480
  481 MLKAAEMANV HEFVSKMDDG YDTKCGEKGV QMSGGQKQRI AIARALIRNP RVLILDEATS 540
  541 ALDSESEGMV QEALNKCAKE RTVIVIAHRL STVRKAQKIA VIENGSVKEM GCHDELMENQ 600
  601 DGLYYKLVSK QLGSIVDTNI FNCFDMLIFF VLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle