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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: wee-1.3
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDTEGNSSM DSIRNGQSSP LPQVTPRLPQ IPMMMRETPL STKRERQAIT PRFRRPAPKM  60
   61 IKTMPPTRSI WSVRKESVPL LVTPQGPKPL ESPKYDHTNA QSFFEQVFQI DEIIGRGSFG 120
  121 EVFAARCRED SQLYAVKVSL APIRQHSISK YREAESHMII PPHKNLVKFY RAWEETGRLY 180
  181 IQTELCDQSL LKYCTEKHAL PEDEIWNIFV DLLQAVHHLH SNDMIHDDIK PENIFLTKDM 240
  241 ICKLGDFGLV INLKNPNDVK SAEEGDSKYL APEVLNGRPT KSSDIFSLGM TILEATTDLD 300
  301 VPSNGDSWHQ IRNGQIPDRF FAGISTDLRS LIALMLDSDP RIRPTSRDLL DHPVIKKKLM 360
  361 KRGTYVKCIS ILNGFFYAFS AVLVWVMAFF SVLFHPIVRF HAAIKDRQSE ICAQFVNNQQ 420
  421 HTPIQTPETS KVYLESLTGV AVRQASQIVS PFDFSDDENP PNAQRRLFTG AVPCRLNFDN 480
  481 DQDDDEEQAT CSSSNSSAIE PQLDEPESPP RMNDVIDKLG KRGTPRSARR NLTFNRHRQV 540
  541 AASVAPKSSL NHYNHHTGSG DGFSNNSLIP ISDQERTEKY LRMRLTEQQL DWADQNNVID 600
  601 EAPPPMSCPP RIRRSIRDLP RMPVLNFNVL DEPSNKPTVD HHTILEQSES PRRRLNRGAK 660
  661 PVPRNRMMSF GSSGDEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle