YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE14390
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILKLILVP VAIGVLAAAV WNLLPEKEIN VEENNYYGSG KAKPDNTEIK PFKVNVEQSV  60
   61 IDDLKHRLQN ARISHSVLED SDDFYYGFNS KQLLKLRDYW LNKYDWRKQE ATINQFPQFK 120
  121 TEIEGLQVHF LHVKPPKSYK NVKPILVAHG WPGNVFEFYK FIPLLTDPKK HGIDSDFAFE 180
  181 VIAPSIPGYG WSDQPKKTGF SQLACARVFR KLMLRLGYNK FYLQGGDWGA IITSLLTKVY 240
  241 PQNVMALHLN MMPAMPGANA LGTFYDILGW LIPSTLSSKE IQKTHNPFSK FGLLIVETGY 300
  301 MHLQATKPDT AGTSLNDSPI GLAAYIIEKF STWTNTENRA LPDGGLNKRF TNDELLTIVM 360
  361 IYWTNGNIVS SQRFYREMFL DRRCEALGKR YVSTPTAHAS GLNELYDRTP IEVSRHSYNI 420
  421 THYTEIDMGH FAAFEAPKPL AQSVFKFVKD LN

Type	Start	End	Confidence
Signal Peptide	1	19	0.93
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	452	0.98