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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE14174
Protein type: Transmembrane
Type Confidence: 0.79
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQAIPLVTI AAVVIAVGIA IGSLVLNIII LGNVNTLTTT VNNNPVYHYT PAPQVNSTPG  60
   61 TVNTSPSYTQ AANYLLNGLD DTVDPCQDFY AFTCNKFLQN TDLQKLGRSR LGTYDQAQVD 120
  121 VYSEIVAALS KIDVTSTTTS KTERITKAAF ETCKNNLASP ADKTAVVYAE ITSLFGGVPF 180
  181 FGEPLKTNVD YWMVAGQIEQ KHAVGTLTYT IASSDYKDHT KNALYTGPPG LSLARDFYVK 240
  241 PQYIAEVNQR VSDVNDLLTA FANAAKKNVG ADALLAAAQE VVNFEVQIAM ASWPDDLLRN 300
  301 YQQQYNPYNI ASATTAYRAI NWKSYLGQLF HGVASDADQA NYNIVVTEPS YFAWLNSVFD 360
  361 GKTSNSTVVA NYMIAQLLAD ESDFINPATA KVSSDTNYIH YALRNGRGIK KIGKREYRMA 420
  421 DLDGISEGCM DLLTAYMPYG TGYVYVKSKS ERNKVQADVK DQTTLIINNF QGMIDSLNWM 480
  481 DTFSKNRAHN KSDSLVKNFG WPEAMFGDFN DFTTVDAYNQ DYASIIDLYT KDKNDIYGIF 540
  541 AVLKKGMEVR EFFRIMGEPA DRTNFLQSPA MVNAWYQPER NSITFPYAAW NPPYYNLNYP 600
  601 QAYNFAGQGG TGGHELTHGY DDEGVQFGFN GELTDCSWNK CGWMDTNSSS GFIDMAQCVV 660
  661 TQFSTQCCPE KTGNIHCANG ATTQGENIAD LGGQQAAYRS YRQYVATTRK GVEEDRLPGL 720
  721 ENYTPNQIFW ITYGYSWCMK QSDANLVHQL LTNPHSPAQC RTNQVMQDIP EFGKDFGCVR 780
  781 GSPMYPEPSG RCKVWVGQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle